| Total sequences | 528121 |
| New sequences | 69 |
| New lineages | [] |
| New mutations | |
| intergenic | g.C-25T EG.5.1.8 |
| intergenic | F8S EG.5.1.8 |
| intergenic | K47R EG.5.1.8 |
| intergenic | Y97Y EG.5.1.8 |
| intergenic | S135R EG.5.1.8 |
| intergenic | F190F EG.5.1.8 |
| intergenic | S318L EG.5.1.8 |
| intergenic | K322T EG.5.1.8 |
| intergenic | C341C EG.5.1.8 |
| intergenic | S391P EG.5.1.8 |
| intergenic | S558S EG.5.1.8 |
| intergenic | R560H EG.5.1.8 |
| intergenic | V606V EG.5.1.8 |
| intergenic | V665I EG.5.1.8 |
| intergenic | A690V EG.5.1.8 |
| intergenic | L778L EG.5.1.8 |
| intergenic | A801V EG.5.1.8 |
| intergenic | G817G EG.5.1.8 |
| intergenic | T842I EG.5.1.8 |
| intergenic | T861T EG.5.1.8 |
| intergenic | V874F EG.5.1.8 |
| intergenic | F924F EG.5.1.8 |
| intergenic | L1130F EG.5.1.8 |
| intergenic | G1307S EG.5.1.8 |
| intergenic | A1352A EG.5.1.8 |
| intergenic | D1554D EG.5.1.8 |
| intergenic | P1640L EG.5.1.8 |
| intergenic | G1819S EG.5.1.8 |
| intergenic | K1895K EG.5.1.8 |
| intergenic | S2022L EG.5.1.8 |
| intergenic | K2059K EG.5.1.8 |
| intergenic | D2060D EG.5.1.8 |
| intergenic | F2334F EG.5.1.8 |
| intergenic | A2379V EG.5.1.8 |
| intergenic | A2379A EG.5.1.8 |
| intergenic | V2491I EG.5.1.8 |
| intergenic | T2495I EG.5.1.8 |
| intergenic | P2739S EG.5.1.8 |
| intergenic | T2823T EG.5.1.8 |
| intergenic | T2836I EG.5.1.8 |
| intergenic | L3027F EG.5.1.8 |
| intergenic | LT3027FA EG.5.1.8 |
| intergenic | V3053V EG.5.1.8 |
| intergenic | I3055I EG.5.1.8 |
| intergenic | T3090I EG.5.1.8 |
| intergenic | A3143V EG.5.1.8 |
| intergenic | L3201F EG.5.1.8 |
| intergenic | T3255I EG.5.1.8 |
| intergenic | T3258T EG.5.1.8 |
| intergenic | D3311D EG.5.1.8 |
| intergenic | P3395H EG.5.1.8 |
| intergenic | D3479D EG.5.1.8 |
| intergenic | L3545L EG.5.1.8 |
| intergenic | L3606F EG.5.1.8 |
| intergenic | A3615V EG.5.1.8 |
| intergenic | 3676del EG.5.1.8 |
| intergenic | F3677del EG.5.1.8 |
| intergenic | S3675del EG.5.1.8 |
| intergenic | V3683A EG.5.1.8 |
| intergenic | V3747V EG.5.1.8 |
| intergenic | M3752I EG.5.1.8 |
| intergenic | Q3942Q EG.5.1.8 |
| intergenic | A3945A EG.5.1.8 |
| intergenic | T4175I EG.5.1.8 |
| intergenic | I4205I EG.5.1.8 |
| intergenic | L4237L EG.5.1.8 |
| intergenic | D4317D EG.5.1.8 |
| intergenic | F4342I EG.5.1.8 |
| intergenic | P4715L EG.5.1.8 |
| intergenic | Y4848Y EG.5.1.8 |
| intergenic | G5063S EG.5.1.8 |
| intergenic | L5150L EG.5.1.8 |
| intergenic | F5158F EG.5.1.8 |
| intergenic | D5225D EG.5.1.8 |
| intergenic | A5232A EG.5.1.8 |
| intergenic | C5332C EG.5.1.8 |
| intergenic | V5358I EG.5.1.8 |
| intergenic | S5360P EG.5.1.8 |
| intergenic | T5538T EG.5.1.8 |
| intergenic | P5566P EG.5.1.8 |
| intergenic | R5716C EG.5.1.8 |
| intergenic | A5727V EG.5.1.8 |
| intergenic | Y5865Y EG.5.1.8 |
| intergenic | I5967V EG.5.1.8 |
| intergenic | P6076P EG.5.1.8 |
| intergenic | V6107L EG.5.1.8 |
| intergenic | T6131T EG.5.1.8 |
| intergenic | I6167V EG.5.1.8 |
| intergenic | G6173S EG.5.1.8 |
| intergenic | P6354P EG.5.1.8 |
| intergenic | T6564I EG.5.1.8 |
| intergenic | E6597E EG.5.1.8 |
| intergenic | K6678K EG.5.1.8 |
| intergenic | H6686Y EG.5.1.8 |
| intergenic | L6848L EG.5.1.8 |
| intergenic | A6870G EG.5.1.8 |
| intergenic | T19I EG.5.1.8 |
| intergenic | L24_A27delinsS EG.5.1.8 |
| intergenic | T29I EG.5.1.8 |
| intergenic | Q52H EG.5.1.8 |
| intergenic | H69Y EG.5.1.8 |
| intergenic | V83A EG.5.1.8 |
| intergenic | V83T EG.5.1.8 |
| intergenic | T95I EG.5.1.8 |
| intergenic | G142D EG.5.1.8 |
| intergenic | G142_Y144delinsDV EG.5.1.8 |
| intergenic | G142fs EG.5.1.8 |
| intergenic | H146K EG.5.1.8 |
| intergenic | H146Q EG.5.1.8 |
| intergenic | V171V EG.5.1.8 |
| intergenic | Q183E EG.5.1.8 |
| intergenic | V213E EG.5.1.8 |
| intergenic | G252V EG.5.1.8 |
| intergenic | F306F EG.5.1.8 |
| intergenic | K310K EG.5.1.8 |
| intergenic | N334N EG.5.1.8 |
| intergenic | G339H EG.5.1.8 |
| intergenic | R346I EG.5.1.8 |
| intergenic | R346T EG.5.1.8 |
| intergenic | L368I EG.5.1.8 |
| intergenic | S371F EG.5.1.8 |
| intergenic | S373P EG.5.1.8 |
| intergenic | ST375FA EG.5.1.8 |
| intergenic | D405N EG.5.1.8 |
| intergenic | R408S EG.5.1.8 |
| intergenic | K417N EG.5.1.8 |
| intergenic | N440K EG.5.1.8 |
| intergenic | VG445PS EG.5.1.8 |
| intergenic | LF455FL EG.5.1.8 |
| intergenic | N460K EG.5.1.8 |
| intergenic | ST477NK EG.5.1.8 |
| intergenic | EGF484ADP EG.5.1.8 |
| intergenic | EGF484AGP EG.5.1.8 |
| intergenic | F490S EG.5.1.8 |
| intergenic | N501Y EG.5.1.8 |
| intergenic | Y505H EG.5.1.8 |
| intergenic | D614G EG.5.1.8 |
| intergenic | EH654VY EG.5.1.8 |
| intergenic | H655Y EG.5.1.8 |
| intergenic | N679K EG.5.1.8 |
| intergenic | P681H EG.5.1.8 |
| intergenic | N764K EG.5.1.8 |
| intergenic | T887T EG.5.1.8 |
| intergenic | D936H EG.5.1.8 |
| intergenic | Q954H EG.5.1.8 |
| intergenic | N969K EG.5.1.8 |
| intergenic | A1070V EG.5.1.8 |
| intergenic | D1146D EG.5.1.8 |
| intergenic | X1274X EG.5.1.8 |
| intergenic | F8F EG.5.1.8 |
| intergenic | K16R EG.5.1.8 |
| intergenic | T64T EG.5.1.8 |
| intergenic | T89I EG.5.1.8 |
| intergenic | H182R EG.5.1.8 |
| intergenic | T223I EG.5.1.8 |
| intergenic | T9I EG.5.1.8 |
| intergenic | T11A EG.5.1.8 |
| intergenic | V25V EG.5.1.8 |
| intergenic | Q19E EG.5.1.8 |
| intergenic | A63T EG.5.1.8 |
| intergenic | F112F EG.5.1.8 |
| intergenic | G141G EG.5.1.8 |
| intergenic | R20R EG.5.1.8 |
| intergenic | P57L EG.5.1.8 |
| intergenic | P57fs EG.5.1.8 |
| intergenic | D61L EG.5.1.8 |
| intergenic | G38G EG.5.1.8 |
| intergenic | G70G EG.5.1.8 |
| intergenic | L18L EG.5.1.8 |
| intergenic | G8X EG.5.1.8 |
| intergenic | T26A EG.5.1.8 |
| intergenic | g.A-3T EG.5.1.8 |
| intergenic | N8N EG.5.1.8 |
| intergenic | P13L EG.5.1.8 |
| intergenic | E31_S33del EG.5.1.8 |
| intergenic | RG203KR EG.5.1.8 |
| intergenic | G328A EG.5.1.8 |
| intergenic | D358D EG.5.1.8 |
| intergenic | S413R EG.5.1.8 |
| intergenic | S23F EG.5.1.8 |
| intergenic | g.G29688C EG.5.1.8 |
| intergenic | g.G29711T EG.5.1.8 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAC EG.5.1.8 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAT EG.5.1.8 |
| intergenic | g.C-25T EG.5.1.8,HK.1 |
| intergenic | V5F HK.1 |
| intergenic | H45Q HK.1 |
| intergenic | K47R EG.5.1.8,HK.1 |
| intergenic | S135R EG.5.1.8,HK.1 |
| intergenic | I473I HK.1 |
| intergenic | Q526H HK.1 |
| intergenic | G604S HK.1 |
| intergenic | A690V EG.5.1.8,HK.1 |
| intergenic | L758L HK.1 |
| intergenic | T842I EG.5.1.8,HK.1 |
| intergenic | F924F EG.5.1.8,HK.1 |
| intergenic | P927L HK.1 |
| intergenic | G1307S EG.5.1.8,HK.1 |
| intergenic | A1352A EG.5.1.8,HK.1 |
| intergenic | G1819S EG.5.1.8,HK.1 |
| intergenic | T1881I HK.1 |
| intergenic | H2092H HK.1 |
| intergenic | D2525D HK.1 |
| intergenic | N2628N HK.1 |
| intergenic | L3027F EG.5.1.8,HK.1 |
| intergenic | V3053V EG.5.1.8,HK.1 |
| intergenic | T3090I EG.5.1.8,HK.1 |
| intergenic | A3143V EG.5.1.8,HK.1 |
| intergenic | L3201F EG.5.1.8,HK.1 |
| intergenic | T3255I EG.5.1.8,HK.1 |
| intergenic | D3311D EG.5.1.8,HK.1 |
| intergenic | P3395H EG.5.1.8,HK.1 |
| intergenic | 3676del EG.5.1.8,HK.1 |
| intergenic | F3677del EG.5.1.8,HK.1 |
| intergenic | S3675del EG.5.1.8,HK.1 |
| intergenic | F3838F HK.1 |
| intergenic | T4175I EG.5.1.8,HK.1 |
| intergenic | D4190D HK.1 |
| intergenic | I4205I EG.5.1.8,HK.1 |
| intergenic | C4299C HK.1 |
| intergenic | L4391F HK.1 |
| intergenic | D4455N HK.1 |
| intergenic | V4558V HK.1 |
| intergenic | P4715L EG.5.1.8,HK.1 |
| intergenic | G5063S EG.5.1.8,HK.1 |
| intergenic | L5150L EG.5.1.8,HK.1 |
| intergenic | F5158F EG.5.1.8,HK.1 |
| intergenic | T5193T HK.1 |
| intergenic | D5225D EG.5.1.8,HK.1 |
| intergenic | V5326V HK.1 |
| intergenic | S5360P EG.5.1.8,HK.1 |
| intergenic | T5538T EG.5.1.8,HK.1 |
| intergenic | L5580L HK.1 |
| intergenic | R5716C EG.5.1.8,HK.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1 |
| intergenic | I5967V EG.5.1.8,HK.1 |
| intergenic | P6076P EG.5.1.8,HK.1 |
| intergenic | P6354P EG.5.1.8,HK.1 |
| intergenic | T6564I EG.5.1.8,HK.1 |
| intergenic | E6597E EG.5.1.8,HK.1 |
| intergenic | K6958R HK.1 |
| intergenic | T19I EG.5.1.8,HK.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1 |
| intergenic | Q52H HK.1 |
| intergenic | Q52Y HK.1 |
| intergenic | V83A HK.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1 |
| intergenic | G142_Y145delinsDD HK.1 |
| intergenic | H146Q HK.1 |
| intergenic | Q183E EG.5.1.8,HK.1 |
| intergenic | V213E EG.5.1.8,HK.1 |
| intergenic | G252V EG.5.1.8,HK.1 |
| intergenic | G257V HK.1 |
| intergenic | F306F EG.5.1.8,HK.1 |
| intergenic | G339H EG.5.1.8,HK.1 |
| intergenic | R346T EG.5.1.8,HK.1 |
| intergenic | L368I EG.5.1.8,HK.1 |
| intergenic | SAS371FAP HK.1 |
| intergenic | SAS371FVP HK.1 |
| intergenic | ST375FA EG.5.1.8,HK.1 |
| intergenic | D405N EG.5.1.8,HK.1 |
| intergenic | R408S EG.5.1.8,HK.1 |
| intergenic | K417N EG.5.1.8,HK.1 |
| intergenic | N440K EG.5.1.8,HK.1 |
| intergenic | VG445PS EG.5.1.8,HK.1 |
| intergenic | LF455FL EG.5.1.8,HK.1 |
| intergenic | N460K EG.5.1.8,HK.1 |
| intergenic | ST477NK EG.5.1.8,HK.1 |
| intergenic | E484A HK.1 |
| intergenic | F486P HK.1 |
| intergenic | F490S EG.5.1.8,HK.1 |
| intergenic | S494P HK.1 |
| intergenic | N501Y EG.5.1.8,HK.1 |
| intergenic | Y505H EG.5.1.8,HK.1 |
| intergenic | D614G EG.5.1.8,HK.1 |
| intergenic | H655Y HK.1 |
| intergenic | S659S HK.1 |
| intergenic | N679K EG.5.1.8,HK.1 |
| intergenic | P681H EG.5.1.8,HK.1 |
| intergenic | N764K EG.5.1.8,HK.1 |
| intergenic | Q954H EG.5.1.8,HK.1 |
| intergenic | N969K EG.5.1.8,HK.1 |
| intergenic | D1146D EG.5.1.8,HK.1 |
| intergenic | P1263L HK.1 |
| intergenic | F8F EG.5.1.8,HK.1 |
| intergenic | I20T HK.1 |
| intergenic | V48del HK.1 |
| intergenic | A54S HK.1 |
| intergenic | S60S HK.1 |
| intergenic | T64T EG.5.1.8,HK.1 |
| intergenic | L106L HK.1 |
| intergenic | T223I EG.5.1.8,HK.1 |
| intergenic | T9I EG.5.1.8,HK.1 |
| intergenic | T11A EG.5.1.8,HK.1 |
| intergenic | Q19E EG.5.1.8,HK.1 |
| intergenic | A63T EG.5.1.8,HK.1 |
| intergenic | F112F EG.5.1.8,HK.1 |
| intergenic | R20R EG.5.1.8,HK.1 |
| intergenic | D61L EG.5.1.8,HK.1 |
| intergenic | G38G EG.5.1.8,HK.1 |
| intergenic | S81P HK.1 |
| intergenic | L18L EG.5.1.8,HK.1 |
| intergenic | A43V HK.1 |
| intergenic | G8X EG.5.1.8,HK.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1 |
| intergenic | N8N EG.5.1.8,HK.1 |
| intergenic | P13L EG.5.1.8,HK.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1 |
| intergenic | RG203KR EG.5.1.8,HK.1 |
| intergenic | S413R EG.5.1.8,HK.1 |
| intergenic | S23F EG.5.1.8,HK.1 |
| intergenic | g.G29701T HK.1 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | Y359Y FY.4.1.1 |
| intergenic | R560H EG.5.1.8,FY.4.1.1 |
| intergenic | E832K FY.4.1.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1 |
| ORF1a | C2041Y / NSP3 |
| intergenic | C2041Y FY.4.1.1 |
| intergenic | V2703V FY.4.1.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | F3271F FY.4.1.1 |
| intergenic | S3273S FY.4.1.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | Y4172Y FY.4.1.1 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | T4654A FY.4.1.1 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | T5321A FY.4.1.1 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | Y6160Y FY.4.1.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | P6722S FY.4.1.1 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | V83A HK.1,FY.4.1.1 |
| intergenic | G142D EG.5.1.8,FY.4.1.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | G142fs EG.5.1.8,FY.4.1.1 |
| intergenic | H146K EG.5.1.8,FY.4.1.1 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | Y200C FY.4.1.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | Y451H FY.4.1.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | E484A HK.1,FY.4.1.1 |
| intergenic | F486P HK.1,FY.4.1.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | S494P HK.1,FY.4.1.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | H655Y HK.1,FY.4.1.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | S704L FY.4.1.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | D1139H FY.4.1.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | P42L FY.4.1.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | W131L FY.4.1.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | D265D FY.4.1.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | H125R FY.4.1.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | P46S FY.4.1.1 |
| intergenic | A152V FY.4.1.1 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | A218A FY.4.1.1 |
| intergenic | Y298H FY.4.1.1 |
| intergenic | A313A FY.4.1.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | L92L BA.2.86.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | A211D BA.2.86.1 |
| intergenic | P361P BA.2.86.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | V1056L BA.2.86.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | A1397V BA.2.86.1 |
| intergenic | K1763R BA.2.86.1 |
| intergenic | K1973R BA.2.86.1 |
| intergenic | S2015S BA.2.86.1 |
| intergenic | S2103F BA.2.86.1 |
| intergenic | N2526S BA.2.86.1 |
| intergenic | T2676T BA.2.86.1 |
| intergenic | A2710T BA.2.86.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | I3055I EG.5.1.8,BA.2.86.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | V3593F BA.2.86.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | L3711F BA.2.86.1 |
| intergenic | A3730V BA.2.86.1 |
| intergenic | T4175I EG.5.1.8,HK.1,BA.2.86.1 |
| intergenic | L4184L BA.2.86.1 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | N4358N BA.2.86.1 |
| intergenic | Y4430Y BA.2.86.1 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | S5164S BA.2.86.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | P6076P EG.5.1.8,HK.1,BA.2.86.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | H6701H BA.2.86.1 |
| intergenic | V16_N17insMPLF BA.2.86.1 |
| intergenic | TTR19ITT BA.2.86.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | S50L BA.2.86.1 |
| intergenic | H69del BA.2.86.1 |
| intergenic | V70del BA.2.86.1 |
| intergenic | V127F BA.2.86.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | FR157SG BA.2.86.1 |
| intergenic | N185T BA.2.86.1 |
| intergenic | N211_V213delinsIG BA.2.86.1 |
| intergenic | L216F BA.2.86.1 |
| intergenic | H245N BA.2.86.1 |
| intergenic | A264D BA.2.86.1 |
| intergenic | I332V BA.2.86.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | K356T BA.2.86.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | R403K BA.2.86.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | VG445HS BA.2.86.1 |
| intergenic | N450D BA.2.86.1 |
| intergenic | L452W BA.2.86.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | N481_E484delinsKGK BA.2.86.1 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | E554K BA.2.86.1 |
| intergenic | A570V BA.2.86.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | P621S BA.2.86.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | P681R BA.2.86.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | S939F BA.2.86.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | P1143L BA.2.86.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | Y1215Y BA.2.86.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | S117I BA.2.86.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | D3H BA.2.86.1 |
| intergenic | G6V BA.2.86.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | T30A BA.2.86.1 |
| intergenic | F53F BA.2.86.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | A104V BA.2.86.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | A35V BA.2.86.1 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | Q229K BA.2.86.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | C19C BA.2.86.1 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1 |
| intergenic | g.C-59T GK.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | L16F GK.1 |
| intergenic | V28A GK.1 |
| intergenic | E41K GK.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | M85_V86del GK.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | D147G GK.1 |
| intergenic | I222I GK.1 |
| intergenic | T346I GK.1 |
| intergenic | P361P BA.2.86.1,GK.1 |
| intergenic | L454L GK.1 |
| intergenic | K458Q GK.1 |
| intergenic | G519S GK.1 |
| intergenic | I523V GK.1 |
| intergenic | L570L GK.1 |
| intergenic | I573V GK.1 |
| intergenic | F617L GK.1 |
| intergenic | L642F GK.1 |
| intergenic | I740I GK.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | D928D GK.1 |
| intergenic | H1113Y GK.1 |
| intergenic | N1121T GK.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | L1441L GK.1 |
| intergenic | L1457L GK.1 |
| intergenic | S1515S GK.1 |
| intergenic | T1597I GK.1 |
| intergenic | T1605T GK.1 |
| intergenic | N1709N GK.1 |
| intergenic | K1781K GK.1 |
| intergenic | N1927N GK.1 |
| intergenic | T2007I GK.1 |
| intergenic | P2046S GK.1 |
| intergenic | D2060N GK.1 |
| intergenic | L2175L GK.1 |
| intergenic | G2207S GK.1 |
| intergenic | S2214L GK.1 |
| intergenic | M2374T GK.1 |
| intergenic | S2433S GK.1 |
| intergenic | T2463T GK.1 |
| intergenic | I2501V GK.1 |
| intergenic | S2556S GK.1 |
| intergenic | A2584V GK.1 |
| intergenic | D2592Y GK.1 |
| intergenic | I2634I GK.1 |
| intergenic | V2715I GK.1 |
| intergenic | D2801D GK.1 |
| intergenic | D2824D GK.1 |
| intergenic | F3018F GK.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | S3218S GK.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | T3287I GK.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | K3577K GK.1 |
| intergenic | L3588L GK.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | I3737T GK.1 |
| intergenic | V3748I GK.1 |
| intergenic | T3749A GK.1 |
| intergenic | A3755A GK.1 |
| intergenic | F3785S GK.1 |
| intergenic | V3810V GK.1 |
| intergenic | A3924A GK.1 |
| intergenic | D3994D GK.1 |
| intergenic | A4068S GK.1 |
| intergenic | T4129I GK.1 |
| intergenic | T4175I EG.5.1.8,HK.1,BA.2.86.1,GK.1 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | M4316T GK.1 |
| intergenic | P4486L GK.1 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | G4737G GK.1 |
| intergenic | I4928I GK.1 |
| intergenic | D5015D GK.1 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | T5193I GK.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | R5250R GK.1 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | P5377P GK.1 |
| intergenic | G5378S GK.1 |
| intergenic | S5404G GK.1 |
| intergenic | A5620A GK.1 |
| intergenic | I5700V GK.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | G5818G GK.1 |
| intergenic | N5827K GK.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | I5889I GK.1 |
| intergenic | L5952L GK.1 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | I5999V GK.1 |
| intergenic | P6046S GK.1 |
| intergenic | I6075T GK.1 |
| intergenic | S6143S GK.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | T6618I GK.1 |
| intergenic | A6623V GK.1 |
| intergenic | L6666L GK.1 |
| intergenic | C6823C GK.1 |
| intergenic | I6926V GK.1 |
| intergenic | P7034P GK.1 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | T76N GK.1 |
| intergenic | D80D GK.1 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | N185D GK.1 |
| intergenic | F186L GK.1 |
| intergenic | K187I GK.1 |
| intergenic | I210I GK.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | A222P GK.1 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | T299I GK.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | N354N GK.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | LF455FL EG.5.1.8,HK.1,GK.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | A475V GK.1 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | C525C GK.1 |
| intergenic | E554K BA.2.86.1,GK.1 |
| intergenic | E583Q GK.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | Q677H GK.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | S704L FY.4.1.1,GK.1 |
| intergenic | I726T GK.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | S939F BA.2.86.1,GK.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | H1101H GK.1 |
| intergenic | T1117I GK.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | S1161S GK.1 |
| intergenic | L1270L GK.1 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | T89I GK.1 |
| intergenic | TV89II GK.1 |
| intergenic | L95F GK.1 |
| intergenic | A99A GK.1 |
| intergenic | S117I BA.2.86.1,GK.1 |
| intergenic | R134H GK.1 |
| intergenic | Y212Y GK.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | T229I GK.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | L34F GK.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | L124L GK.1 |
| intergenic | Y179Y GK.1 |
| intergenic | I14M GK.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | T28I GK.1 |
| intergenic | G70S GK.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | W29fs GK.1 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1 |
| intergenic | P38S GK.1 |
| intergenic | A65V GK.1 |
| intergenic | L95L GK.1 |
| intergenic | F120F GK.1 |
| intergenic | I121fs GK.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | S23T GK.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | D98D GK.1 |
| intergenic | D128D GK.1 |
| intergenic | G179S GK.1 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | P344P GK.1 |
| N | P344P GK.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | P10S GK.1 |
| intergenic | N25N GK.1 |
| intergenic | F35Y GK.1 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1,GK.1 |
| intergenic | g.C-166T GK.1.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | E37D GK.1.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | S74S GK.1.1 |
| intergenic | G82_M85delinsV GK.1.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | K141_F143del GK.1.1 |
| intergenic | K261R GK.1.1 |
| intergenic | G295C GK.1.1 |
| intergenic | G295G GK.1.1 |
| intergenic | H374H GK.1.1 |
| intergenic | K468E GK.1.1 |
| intergenic | K492Q GK.1.1 |
| intergenic | G519S GK.1,GK.1.1 |
| intergenic | L570L GK.1,GK.1.1 |
| intergenic | P626P GK.1.1 |
| intergenic | G645S GK.1.1 |
| intergenic | Q663Q GK.1.1 |
| intergenic | L766L GK.1.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | P943S GK.1.1 |
| intergenic | V1056V GK.1.1 |
| intergenic | L1243L GK.1.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | H1545H GK.1.1 |
| intergenic | K1569R GK.1.1 |
| intergenic | N1576N GK.1.1 |
| intergenic | P1810L GK.1.1 |
| intergenic | P1811P GK.1.1 |
| intergenic | P2018S GK.1.1 |
| intergenic | S2030L GK.1.1 |
| intergenic | L2122F GK.1.1 |
| intergenic | S2433S GK.1,GK.1.1 |
| intergenic | D2525D HK.1,GK.1.1 |
| intergenic | V2665F GK.1.1 |
| intergenic | D2717N GK.1.1 |
| intergenic | D2824D GK.1,GK.1.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | A3079V GK.1.1 |
| intergenic | F3085F GK.1.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | L3198L GK.1.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | N3291N GK.1.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | A3357A GK.1.1 |
| intergenic | R3368R GK.1.1 |
| intergenic | A3379V GK.1.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | L3606F EG.5.1.8,GK.1.1 |
| intergenic | R3662C GK.1.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | L3754L GK.1.1 |
| intergenic | L3781I GK.1.1 |
| intergenic | G3846S GK.1.1 |
| intergenic | E3932G GK.1.1 |
| intergenic | T3940T GK.1.1 |
| intergenic | L4059L GK.1.1 |
| intergenic | I4061T GK.1.1 |
| intergenic | A4068S GK.1,GK.1.1 |
| intergenic | T4158N GK.1.1 |
| intergenic | T4175A GK.1.1 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | G4380G GK.1.1 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | L4779L GK.1.1 |
| intergenic | F4811F GK.1.1 |
| intergenic | V4865I GK.1.1 |
| intergenic | D4891D GK.1.1 |
| intergenic | L4919L GK.1.1 |
| intergenic | A4972A GK.1.1 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | N5105N GK.1.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | S5160N GK.1.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | I5229I GK.1.1 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | A5620A GK.1,GK.1.1 |
| intergenic | H5635H GK.1.1 |
| intergenic | V5680V GK.1.1 |
| intergenic | I5694M GK.1.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | V5808F GK.1.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | L5932L GK.1.1 |
| intergenic | T5956I GK.1.1 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | L6082F GK.1.1 |
| intergenic | V6215I GK.1.1 |
| intergenic | I6263V GK.1.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | L6454L GK.1.1 |
| intergenic | G6469E GK.1.1 |
| intergenic | A6560A GK.1.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | A6623A GK.1.1 |
| intergenic | F6628F GK.1.1 |
| intergenic | P6642P GK.1.1 |
| intergenic | Q6850Q GK.1.1 |
| intergenic | T6854I GK.1.1 |
| intergenic | P7049P GK.1.1 |
| intergenic | L5F GK.1.1 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | L24_A27delinsS GK.1.1 |
| intergenic | P25_A27del GK.1.1 |
| intergenic | F32L GK.1.1 |
| S | F32L GK.1.1 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | S94A GK.1.1 |
| intergenic | S98F GK.1.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | G142fs EG.5.1.8,FY.4.1.1,GK.1.1 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | S256L GK.1.1 |
| intergenic | A264S GK.1.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | N354N GK.1,GK.1.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | LF455FL EG.5.1.8,HK.1,GK.1,GK.1.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | STP477NKL GK.1.1 |
| intergenic | EGF484AGP EG.5.1.8,GK.1.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | F559F GK.1.1 |
| intergenic | T573I GK.1.1 |
| intergenic | E583D GK.1.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | A626S GK.1.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | S704L FY.4.1.1,GK.1,GK.1.1 |
| intergenic | P728P GK.1.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | N824N GK.1.1 |
| intergenic | D936D GK.1.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | G1124V GK.1.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | S1161S GK.1,GK.1.1 |
| intergenic | N1178N GK.1.1 |
| intergenic | K1191R GK.1.1 |
| intergenic | I1216M GK.1.1 |
| intergenic | S1252A GK.1.1 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | D27H GK.1.1 |
| intergenic | D27D GK.1.1 |
| intergenic | A54V GK.1.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | T89I EG.5.1.8,GK.1.1 |
| intergenic | V97I GK.1.1 |
| intergenic | T175I GK.1.1 |
| intergenic | H182Y GK.1.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | Y264Y GK.1.1 |
| intergenic | D265D FY.4.1.1,GK.1.1 |
| intergenic | S272S GK.1.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | N15N GK.1.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | Y71Y GK.1.1 |
| intergenic | L93L GK.1.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | Y179Y GK.1,GK.1.1 |
| intergenic | L181L GK.1.1 |
| intergenic | L16L GK.1.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | Y31Y GK.1.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | P34S GK.1.1 |
| intergenic | H47N GK.1.1 |
| intergenic | G70C GK.1.1 |
| intergenic | A15S GK.1.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | L32F GK.1.1 |
| intergenic | A43V HK.1,GK.1.1 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1 |
| intergenic | GI8X GK.1.1 |
| intergenic | H28R GK.1.1 |
| intergenic | D35Y GK.1.1 |
| intergenic | P38S GK.1,GK.1.1 |
| intergenic | R52I GK.1.1 |
| intergenic | S69S GK.1.1 |
| intergenic | Q72H GK.1.1 |
| intergenic | E110Q GK.1.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | D22A GK.1.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | F53F GK.1.1 |
| intergenic | F110F GK.1.1 |
| intergenic | P117P GK.1.1 |
| intergenic | D128D GK.1,GK.1.1 |
| intergenic | A134A GK.1.1 |
| intergenic | P162L GK.1.1 |
| intergenic | A173V GK.1.1 |
| intergenic | Q181K GK.1.1 |
| intergenic | T198I GK.1.1 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | G287G GK.1.1 |
| intergenic | T379T GK.1.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1 |
| intergenic | C19C BA.2.86.1,GK.1.1 |
| intergenic | g.G29706A GK.1.1 |
| intergenic | g.CACCGAGGCCACGCGGAGTACGATCGAGTG29730CACC GK.1.1 |
| intergenic | g.CACCGAGGCCACGCGGAGTACGATCGAGTG29730TACC GK.1.1 |
| intergenic | g.C-83T GK.2.1 |
| intergenic | g.T-71C GK.2.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | Q66Q GK.2.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | G150C GK.2.1 |
| intergenic | G192S GK.2.1 |
| intergenic | P361P BA.2.86.1,GK.1,GK.2.1 |
| intergenic | A535V GK.2.1 |
| intergenic | A540V GK.2.1 |
| intergenic | L570L GK.1,GK.1.1,GK.2.1 |
| intergenic | L624I GK.2.1 |
| intergenic | T654I GK.2.1 |
| intergenic | D762D GK.2.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | L853L GK.2.1 |
| intergenic | P892L GK.2.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | S944L GK.2.1 |
| intergenic | S1106N GK.2.1 |
| intergenic | AG1306SS GK.2.1 |
| intergenic | G1307S GK.2.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | D1547N GK.2.1 |
| intergenic | I1607V GK.2.1 |
| intergenic | P1786S GK.2.1 |
| intergenic | D2074D GK.2.1 |
| intergenic | H2092H HK.1,GK.2.1 |
| intergenic | F2172F GK.2.1 |
| intergenic | S2433S GK.1,GK.1.1,GK.2.1 |
| intergenic | P2483S GK.2.1 |
| intergenic | S2720A GK.2.1 |
| intergenic | D2824D GK.1,GK.1.1,GK.2.1 |
| intergenic | T2872T GK.2.1 |
| intergenic | V3005I GK.2.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | Q3332R GK.2.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | L3641S GK.2.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | N3774N GK.2.1 |
| intergenic | A4068S GK.1,GK.1.1,GK.2.1 |
| intergenic | D4166D GK.2.1 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | L4228L GK.2.1 |
| intergenic | D4384D GK.2.1 |
| intergenic | I4498T GK.2.1 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | R4975K GK.2.1 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | S5164C GK.2.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | P5377S GK.2.1 |
| intergenic | I5403V GK.2.1 |
| intergenic | A5620A GK.1,GK.1.1,GK.2.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | L5850L GK.2.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | L6102L GK.2.1 |
| intergenic | P6128S GK.2.1 |
| intergenic | L6308L GK.2.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | K6958R HK.1,GK.2.1 |
| intergenic | K6980N GK.2.1 |
| intergenic | R7014H GK.2.1 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1 |
| intergenic | S45S GK.2.1 |
| intergenic | G72R GK.2.1 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | H146Q HK.1,GK.2.1 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | I210del GK.2.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | L216F BA.2.86.1,GK.2.1 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | E281G GK.2.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | N354N GK.1,GK.1.1,GK.2.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | LF455FL EG.5.1.8,HK.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | V511I GK.2.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | E702E GK.2.1 |
| intergenic | L727L GK.2.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | P1162S GK.2.1 |
| intergenic | S1161S GK.1,GK.1.1,GK.2.1 |
| intergenic | C1243F GK.2.1 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | H78Y GK.2.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | H247H GK.2.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | S68F GK.2.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | Y179Y GK.1,GK.1.1,GK.2.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | A8E GK.2.1 |
| intergenic | T28I GK.1,GK.2.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | L25F GK.2.1 |
| intergenic | L34L GK.2.1 |
| intergenic | E39X GK.2.1 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | T11I GK.2.1 |
| intergenic | Q27X GK.2.1 |
| intergenic | P38S GK.1,GK.1.1,GK.2.1 |
| intergenic | F120F GK.1,GK.2.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1,GK.2.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | G34G GK.2.1 |
| intergenic | A50A GK.2.1 |
| intergenic | A152S GK.2.1 |
| intergenic | RG203KR GK.2.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1 |
| intergenic | C19C BA.2.86.1,GK.1.1,GK.2.1 |
| intergenic | g.G29688T GK.2.1 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1 |
| intergenic | g.T-162C JE.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | T214T JE.1 |
| intergenic | P305P JE.1 |
| intergenic | S428S JE.1 |
| intergenic | I693I JE.1 |
| intergenic | T711T JE.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | D953Y JE.1 |
| intergenic | A1060T JE.1 |
| intergenic | T1269S JE.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1 |
| intergenic | D1323D JE.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | P1497L JE.1 |
| intergenic | L1579I JE.1 |
| intergenic | P1803S JE.1 |
| intergenic | G2091S JE.1 |
| intergenic | L2518L JE.1 |
| intergenic | H2831R JE.1 |
| intergenic | V2975V JE.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | T3258T EG.5.1.8,JE.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | I4098I JE.1 |
| intergenic | I4205V JE.1 |
| intergenic | N4235N JE.1 |
| intergenic | D4454Y JE.1 |
| intergenic | Y4665H JE.1 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | Y4847Y JE.1 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | V5092V JE.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | I5248V JE.1 |
| intergenic | R5453K JE.1 |
| intergenic | V5511I JE.1 |
| intergenic | P5624P JE.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | L5824L JE.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | Y6540Y JE.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | C6742F JE.1 |
| intergenic | V6842V JE.1 |
| intergenic | K6958R HK.1,GK.2.1,JE.1 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | D111N JE.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1 |
| intergenic | KQ182NE JE.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | D253G JE.1 |
| intergenic | I312I JE.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | N450D BA.2.86.1,JE.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | ST477NR JE.1 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | P521S JE.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | C760C JE.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | L1234I JE.1 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | F43F JE.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | T175I GK.1.1,JE.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | L93L GK.1.1,JE.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | N121N JE.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | g.C-5T JE.1 |
| intergenic | A13V JE.1 |
| intergenic | G70G EG.5.1.8,JE.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | E19X JE.1 |
| intergenic | V32L JE.1 |
| intergenic | E106Q JE.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1 |
| intergenic | L331L JE.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1 |
| intergenic | g.C-13T JE.1 |
| intergenic | g.G29706T JE.1 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1 |
| intergenic | g.T-121C EG.5.1.6 |
| intergenic | g.C-104T EG.5.1.6 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | G82_H83del EG.5.1.6 |
| intergenic | E87D EG.5.1.6 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | S166G EG.5.1.6 |
| intergenic | L204L EG.5.1.6 |
| intergenic | D220D EG.5.1.6 |
| intergenic | P309S EG.5.1.6 |
| intergenic | I473I HK.1,EG.5.1.6 |
| intergenic | Q556R EG.5.1.6 |
| intergenic | L642F GK.1,EG.5.1.6 |
| intergenic | I659I EG.5.1.6 |
| intergenic | A690V EG.5.1.8,HK.1,EG.5.1.6 |
| intergenic | T829I EG.5.1.6 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | S944L GK.2.1,EG.5.1.6 |
| intergenic | Y955Y EG.5.1.6 |
| intergenic | L1034F EG.5.1.6 |
| intergenic | L1130F EG.5.1.8,EG.5.1.6 |
| intergenic | D1273D EG.5.1.6 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6 |
| intergenic | N1324T EG.5.1.6 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | N1578N EG.5.1.6 |
| intergenic | A1679V EG.5.1.6 |
| intergenic | G1819S EG.5.1.8,HK.1,EG.5.1.6 |
| intergenic | S1857L EG.5.1.6 |
| intergenic | I1935I EG.5.1.6 |
| intergenic | E1954D EG.5.1.6 |
| intergenic | P2046S GK.1,EG.5.1.6 |
| intergenic | V2047F EG.5.1.6 |
| intergenic | A2139A EG.5.1.6 |
| intergenic | W2232C EG.5.1.6 |
| ORF1a | L2250L / NSP3 |
| intergenic | L2250L EG.5.1.6 |
| intergenic | G2265D EG.5.1.6 |
| intergenic | S2273P EG.5.1.6 |
| intergenic | P2483L EG.5.1.6 |
| intergenic | I2490I EG.5.1.6 |
| intergenic | S2493I EG.5.1.6 |
| intergenic | S2625S EG.5.1.6 |
| intergenic | S2635S EG.5.1.6 |
| ORF1a | E2653K / NSP3 |
| intergenic | S2797F EG.5.1.6 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | L3041F EG.5.1.6 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | A3143V EG.5.1.8,HK.1,EG.5.1.6 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | Y3226Y EG.5.1.6 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | F3568F EG.5.1.6 |
| intergenic | L3606F EG.5.1.8,GK.1.1,EG.5.1.6 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | Y3701Y EG.5.1.6 |
| intergenic | S3742S EG.5.1.6 |
| intergenic | F3770F EG.5.1.6 |
| intergenic | M3862I EG.5.1.6 |
| intergenic | S3885T EG.5.1.6 |
| intergenic | S4093S EG.5.1.6 |
| intergenic | T4175I EG.5.1.8,HK.1,BA.2.86.1,GK.1,EG.5.1.6 |
| intergenic | D4190G EG.5.1.6 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6 |
| intergenic | R4214R EG.5.1.6 |
| intergenic | T4265I EG.5.1.6 |
| intergenic | D4335Y EG.5.1.6 |
| intergenic | V4372V EG.5.1.6 |
| intergenic | G4620S EG.5.1.6 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | V4765V EG.5.1.6 |
| intergenic | V4865F EG.5.1.6 |
| intergenic | V4885V EG.5.1.6 |
| intergenic | D4915D EG.5.1.6 |
| intergenic | E5002D EG.5.1.6 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | Y5276Y EG.5.1.6 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6 |
| intergenic | P5371P EG.5.1.6 |
| intergenic | T5538T EG.5.1.8,HK.1,EG.5.1.6 |
| intergenic | Y5541Y EG.5.1.6 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | K5738R EG.5.1.6 |
| intergenic | G5739S EG.5.1.6 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | L5905F EG.5.1.6 |
| intergenic | L5952F EG.5.1.6 |
| intergenic | V5954V EG.5.1.6 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | T5975T EG.5.1.6 |
| intergenic | P6076P EG.5.1.8,HK.1,BA.2.86.1,EG.5.1.6 |
| ORF1b | V6124M / NSP14 |
| intergenic | Q6187Q EG.5.1.6 |
| intergenic | K6236N EG.5.1.6 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | A6832V EG.5.1.6 |
| intergenic | G6953G EG.5.1.6 |
| intergenic | L10L EG.5.1.6 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | T22I EG.5.1.6 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | Q52H EG.5.1.8,EG.5.1.6 |
| intergenic | V70V EG.5.1.6 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | G142D EG.5.1.8,FY.4.1.1,EG.5.1.6 |
| intergenic | G142_Y144delinsDF EG.5.1.6 |
| S | G142_Y144delinsDF EG.5.1.6 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | G142fs EG.5.1.8,FY.4.1.1,GK.1.1,EG.5.1.6 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6 |
| intergenic | N211I EG.5.1.6 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | H245Y EG.5.1.6 |
| S | R246G EG.5.1.6 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6 |
| intergenic | F306F EG.5.1.8,HK.1,EG.5.1.6 |
| intergenic | T333T EG.5.1.6 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | LF455FL EG.5.1.8,HK.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | S494P HK.1,FY.4.1.1,EG.5.1.6 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | N606N EG.5.1.6 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | P715P EG.5.1.6 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | A783A EG.5.1.6 |
| S | A783A EG.5.1.6 |
| intergenic | E819E EG.5.1.6 |
| intergenic | S937S EG.5.1.6 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | S1051S EG.5.1.6 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | D1165G EG.5.1.6 |
| intergenic | X1274X EG.5.1.6 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | A23S EG.5.1.6 |
| intergenic | F56L EG.5.1.6 |
| intergenic | S60S HK.1,EG.5.1.6 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | S74S EG.5.1.6 |
| intergenic | V112F EG.5.1.6 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | F230F EG.5.1.6 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | F53F BA.2.86.1,EG.5.1.6 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | P132P EG.5.1.6 |
| intergenic | S213S EG.5.1.6 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | 40 EG.5.1.6 |
| intergenic | G38G EG.5.1.8,HK.1,EG.5.1.6 |
| intergenic | D69D EG.5.1.6 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | g.C-1T EG.5.1.6 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6 |
| intergenic | H17Y EG.5.1.6 |
| intergenic | E110X EG.5.1.6 |
| intergenic | R115C EG.5.1.6 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1,GK.2.1,EG.5.1.6 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | D103Y EG.5.1.6 |
| intergenic | A138A EG.5.1.6 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6 |
| intergenic | G243C EG.5.1.6 |
| intergenic | G287G GK.1.1,EG.5.1.6 |
| intergenic | I351V EG.5.1.6 |
| intergenic | P383L EG.5.1.6 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | S23F EG.5.1.8,HK.1,EG.5.1.6 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6 |
| intergenic | g.G29825A EG.5.1.6 |
| intergenic | g.G-92T XBB.1.42.1 |
| intergenic | g.-25delC XBB.1.42.1 |
| intergenic | g.C-25T XBB.1.42.1 |
| intergenic | R24C XBB.1.42.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | G82_M85delinsV GK.1.1,XBB.1.42.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | K141_F143del GK.1.1,XBB.1.42.1 |
| intergenic | T170N XBB.1.42.1 |
| intergenic | Y182Y XBB.1.42.1 |
| intergenic | P271L XBB.1.42.1 |
| intergenic | M297I XBB.1.42.1 |
| intergenic | T333M XBB.1.42.1 |
| intergenic | Q362P XBB.1.42.1 |
| intergenic | R398C XBB.1.42.1 |
| intergenic | I473I HK.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | K518K XBB.1.42.1 |
| intergenic | I573T XBB.1.42.1 |
| intergenic | N811N XBB.1.42.1 |
| intergenic | T829A XBB.1.42.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | S944L GK.2.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | F962V XBB.1.42.1 |
| intergenic | D1044D XBB.1.42.1 |
| intergenic | V1052V XBB.1.42.1 |
| ORF1a | P1096L / NSP3 |
| intergenic | P1096L XBB.1.42.1 |
| intergenic | D1228Y XBB.1.42.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | A1397A XBB.1.42.1 |
| intergenic | I1525V XBB.1.42.1 |
| intergenic | S1612L XBB.1.42.1 |
| intergenic | T1854I XBB.1.42.1 |
| intergenic | I1935S XBB.1.42.1 |
| intergenic | L2062F XBB.1.42.1 |
| intergenic | S2104I XBB.1.42.1 |
| intergenic | T2154I XBB.1.42.1 |
| intergenic | S2193F XBB.1.42.1 |
| intergenic | L2211L XBB.1.42.1 |
| intergenic | P2287L XBB.1.42.1 |
| intergenic | C2455C XBB.1.42.1 |
| intergenic | N2523N XBB.1.42.1 |
| intergenic | P2685T XBB.1.42.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | K3162R XBB.1.42.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | D3903D XBB.1.42.1 |
| intergenic | V3917V XBB.1.42.1 |
| intergenic | S3983F XBB.1.42.1 |
| intergenic | P4058P XBB.1.42.1 |
| intergenic | T4175I EG.5.1.8,HK.1,BA.2.86.1,GK.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1 |
| ORF1a | N4256N / NSP10 |
| intergenic | N4256N XBB.1.42.1 |
| intergenic | N4263N XBB.1.42.1 |
| intergenic | V4372I XBB.1.42.1 |
| intergenic | R4510C XBB.1.42.1 |
| intergenic | V4520I XBB.1.42.1 |
| intergenic | T4651I XBB.1.42.1 |
| intergenic | Y4686Y XBB.1.42.1 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | D4782D XBB.1.42.1 |
| intergenic | Q4836H XBB.1.42.1 |
| intergenic | T4948T XBB.1.42.1 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | V5236V XBB.1.42.1 |
| intergenic | A5342V XBB.1.42.1 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | T5435A XBB.1.42.1 |
| intergenic | T5538T EG.5.1.8,HK.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | Y5541Y EG.5.1.6,XBB.1.42.1 |
| intergenic | L5564L XBB.1.42.1 |
| intergenic | T5675I XBB.1.42.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | V5868V XBB.1.42.1 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | I5970M XBB.1.42.1 |
| intergenic | T6175I XBB.1.42.1 |
| intergenic | V6212F XBB.1.42.1 |
| intergenic | A6285S XBB.1.42.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | R6417R XBB.1.42.1 |
| intergenic | D6530D XBB.1.42.1 |
| intergenic | D6543G XBB.1.42.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | L6614F XBB.1.42.1 |
| intergenic | P7034P GK.1,XBB.1.42.1 |
| intergenic | S12A XBB.1.42.1 |
| S | S12A XBB.1.42.1 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | S45S GK.2.1,XBB.1.42.1 |
| intergenic | D53D XBB.1.42.1 |
| intergenic | T76I XBB.1.42.1 |
| intergenic | D80G XBB.1.42.1 |
| intergenic | V83A XBB.1.42.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | G142fs EG.5.1.8,FY.4.1.1,GK.1.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | H146Q HK.1,GK.2.1,XBB.1.42.1 |
| intergenic | Q183D XBB.1.42.1 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | Q218R XBB.1.42.1 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | I358I XBB.1.42.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | ST477NR JE.1,XBB.1.42.1 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | V595I XBB.1.42.1 |
| intergenic | QD613HG XBB.1.42.1 |
| intergenic | H625Y XBB.1.42.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | I870V XBB.1.42.1 |
| intergenic | A879A XBB.1.42.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | V1065L XBB.1.42.1 |
| intergenic | A1078S XBB.1.42.1 |
| intergenic | H1101H GK.1,XBB.1.42.1 |
| intergenic | D1127N XBB.1.42.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | D1153N XBB.1.42.1 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | Y212Y GK.1,XBB.1.42.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | H243R XBB.1.42.1 |
| ORF3a | H243R XBB.1.42.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | L27L XBB.1.42.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | L164L XBB.1.42.1 |
| intergenic | D209Y XBB.1.42.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | I32T XBB.1.42.1 |
| intergenic | S41F XBB.1.42.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | F13del XBB.1.42.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | P38S GK.1,GK.1.1,GK.2.1,XBB.1.42.1 |
| intergenic | I121fs GK.1,XBB.1.42.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | R41Q XBB.1.42.1 |
| intergenic | A50S XBB.1.42.1 |
| intergenic | F110F GK.1.1,XBB.1.42.1 |
| intergenic | I157I XBB.1.42.1 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | g.G-15T XBB.1.42.1 |
| intergenic | T12M XBB.1.42.1 |
| intergenic | A28V XBB.1.42.1 |
| intergenic | N36I XBB.1.42.1 |
| ORF10 | N36I XBB.1.42.1 |
| intergenic | g.A29700G XBB.1.42.1 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1 |
| intergenic | g.T-54C XBB.1.16.15 |
| intergenic | g.C-44T XBB.1.16.15 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15 |
| intergenic | T12I XBB.1.16.15 |
| intergenic | G32G XBB.1.16.15 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | I71I XBB.1.16.15 |
| intergenic | S74P XBB.1.16.15 |
| intergenic | A79V XBB.1.16.15 |
| intergenic | G82_M85delinsV GK.1.1,XBB.1.42.1,XBB.1.16.15 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | N189N XBB.1.16.15 |
| intergenic | T214N XBB.1.16.15 |
| intergenic | S302S XBB.1.16.15 |
| intergenic | P309L XBB.1.16.15 |
| intergenic | T333T XBB.1.16.15 |
| intergenic | G334G XBB.1.16.15 |
| intergenic | P361T XBB.1.16.15 |
| intergenic | S376L XBB.1.16.15 |
| intergenic | A385A XBB.1.16.15 |
| intergenic | G392G XBB.1.16.15 |
| intergenic | R402R XBB.1.16.15 |
| intergenic | G519S GK.1,GK.1.1,XBB.1.16.15 |
| intergenic | A540V GK.2.1,XBB.1.16.15 |
| intergenic | T551I XBB.1.16.15 |
| intergenic | G572R XBB.1.16.15 |
| intergenic | L580F XBB.1.16.15 |
| intergenic | M598I XBB.1.16.15 |
| intergenic | D629D XBB.1.16.15 |
| intergenic | L730F XBB.1.16.15 |
| intergenic | I740I GK.1,XBB.1.16.15 |
| intergenic | T753I XBB.1.16.15 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | A872T XBB.1.16.15 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | S944L GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | L960L XBB.1.16.15 |
| intergenic | A968V XBB.1.16.15 |
| intergenic | P971S XBB.1.16.15 |
| intergenic | T1001I XBB.1.16.15 |
| intergenic | G1069R XBB.1.16.15 |
| intergenic | H1113Y GK.1,XBB.1.16.15 |
| intergenic | G1119C XBB.1.16.15 |
| intergenic | P1158L XBB.1.16.15 |
| intergenic | S1189S XBB.1.16.15 |
| intergenic | I1203I XBB.1.16.15 |
| intergenic | A1268A XBB.1.16.15 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | K1428R XBB.1.16.15 |
| intergenic | P1472S XBB.1.16.15 |
| intergenic | Y1516Y XBB.1.16.15 |
| intergenic | S1517F XBB.1.16.15 |
| intergenic | G1548C XBB.1.16.15 |
| intergenic | V1629A XBB.1.16.15 |
| intergenic | D1639D XBB.1.16.15 |
| intergenic | K1655N XBB.1.16.15 |
| intergenic | N1672S XBB.1.16.15 |
| intergenic | A1694A XBB.1.16.15 |
| intergenic | T1828I XBB.1.16.15 |
| intergenic | I1892I XBB.1.16.15 |
| intergenic | N1922N XBB.1.16.15 |
| intergenic | F1925F XBB.1.16.15 |
| intergenic | S2024L XBB.1.16.15 |
| intergenic | S2030L GK.1.1,XBB.1.16.15 |
| intergenic | G2126S XBB.1.16.15 |
| intergenic | I2229V XBB.1.16.15 |
| intergenic | G2265S XBB.1.16.15 |
| intergenic | P2287H XBB.1.16.15 |
| intergenic | F2338F XBB.1.16.15 |
| intergenic | T2512I XBB.1.16.15 |
| intergenic | L2518L JE.1,XBB.1.16.15 |
| intergenic | A2554A XBB.1.16.15 |
| intergenic | S2631P XBB.1.16.15 |
| intergenic | D2687D XBB.1.16.15 |
| intergenic | P2950H XBB.1.16.15 |
| intergenic | M2957V XBB.1.16.15 |
| intergenic | V2996I XBB.1.16.15 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | G3169S XBB.1.16.15 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | N3291N GK.1.1,XBB.1.16.15 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | N3326N XBB.1.16.15 |
| intergenic | R3368R GK.1.1,XBB.1.16.15 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | D3439D XBB.1.16.15 |
| ORF1a | A3497A / NSP5 |
| intergenic | A3497A XBB.1.16.15 |
| intergenic | F3568F EG.5.1.6,XBB.1.16.15 |
| intergenic | L3606F EG.5.1.8,GK.1.1,EG.5.1.6,XBB.1.16.15 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | V3708V XBB.1.16.15 |
| intergenic | M3752I EG.5.1.8,XBB.1.16.15 |
| intergenic | I3758S XBB.1.16.15 |
| intergenic | Y3765C XBB.1.16.15 |
| intergenic | L3829F XBB.1.16.15 |
| intergenic | D3897D XBB.1.16.15 |
| intergenic | E4019E XBB.1.16.15 |
| intergenic | P4058P XBB.1.42.1,XBB.1.16.15 |
| intergenic | N4142N XBB.1.16.15 |
| intergenic | A4155A XBB.1.16.15 |
| intergenic | G4178V XBB.1.16.15 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | R4214G XBB.1.16.15 |
| intergenic | T4249I XBB.1.16.15 |
| intergenic | T4477I XBB.1.16.15 |
| intergenic | N4601N XBB.1.16.15 |
| intergenic | N4605N XBB.1.16.15 |
| intergenic | R4641M XBB.1.16.15 |
| intergenic | K4655N XBB.1.16.15 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | V4864V XBB.1.16.15 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | M5147L XBB.1.16.15 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | T5198A XBB.1.16.15 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | A5232A EG.5.1.8,XBB.1.16.15 |
| intergenic | P5310P XBB.1.16.15 |
| intergenic | C5353C XBB.1.16.15 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | P5371L XBB.1.16.15 |
| intergenic | S5398L XBB.1.16.15 |
| intergenic | Q5412Q XBB.1.16.15 |
| intergenic | V5478L XBB.1.16.15 |
| intergenic | N5581N XBB.1.16.15 |
| intergenic | V5680V GK.1.1,XBB.1.16.15 |
| intergenic | V5711V XBB.1.16.15 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | G5724G XBB.1.16.15 |
| intergenic | K5738K XBB.1.16.15 |
| intergenic | M5798V XBB.1.16.15 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | T5923I XBB.1.16.15 |
| intergenic | I5967V XBB.1.16.15 |
| intergenic | E6002D XBB.1.16.15 |
| intergenic | D6147Y XBB.1.16.15 |
| intergenic | S6180I XBB.1.16.15 |
| intergenic | A6192V XBB.1.16.15 |
| intergenic | D6249D XBB.1.16.15 |
| intergenic | H6255H XBB.1.16.15 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | T6397T XBB.1.16.15 |
| intergenic | W6434R XBB.1.16.15 |
| intergenic | V6474L XBB.1.16.15 |
| intergenic | D6530Y XBB.1.16.15 |
| intergenic | A6546T XBB.1.16.15 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | N6729S XBB.1.16.15 |
| intergenic | K6741_V6743delinsM XBB.1.16.15 |
| intergenic | P7034P GK.1,XBB.1.42.1,XBB.1.16.15 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | L54L XBB.1.16.15 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | HK146QN XBB.1.16.15 |
| intergenic | E180V XBB.1.16.15 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | S255F XBB.1.16.15 |
| intergenic | L276L XBB.1.16.15 |
| intergenic | F306F EG.5.1.8,HK.1,EG.5.1.6,XBB.1.16.15 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | ST477NR JE.1,XBB.1.42.1,XBB.1.16.15 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | P521S JE.1,XBB.1.16.15 |
| intergenic | G566S XBB.1.16.15 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | NSP679KSH XBB.1.16.15 |
| intergenic | I692I XBB.1.16.15 |
| intergenic | T732I XBB.1.16.15 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | Q836L XBB.1.16.15 |
| intergenic | C840C XBB.1.16.15 |
| intergenic | Q853Q XBB.1.16.15 |
| intergenic | G932G XBB.1.16.15 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | G1093G XBB.1.16.15 |
| intergenic | I1114I XBB.1.16.15 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | K1191K XBB.1.16.15 |
| intergenic | G1219C XBB.1.16.15 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | D27Y XBB.1.16.15 |
| intergenic | A51V XBB.1.16.15 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | S74S EG.5.1.6,XBB.1.16.15 |
| intergenic | A103V XBB.1.16.15 |
| intergenic | D155H XBB.1.16.15 |
| intergenic | F207F XBB.1.16.15 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | T269T XBB.1.16.15 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | V62F XBB.1.16.15 |
| intergenic | D3D XBB.1.16.15 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | S108S XBB.1.16.15 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | N121N JE.1,XBB.1.16.15 |
| intergenic | P132P EG.5.1.6,XBB.1.16.15 |
| intergenic | L164L XBB.1.16.15 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | I10V XBB.1.16.15 |
| intergenic | Y40Y XBB.1.16.15 |
| intergenic | E92D XBB.1.16.15 |
| intergenic | A15V XBB.1.16.15 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | V13I XBB.1.16.15 |
| intergenic | Q23Q XBB.1.16.15 |
| intergenic | C102F XBB.1.16.15 |
| intergenic | F120_I121del XBB.1.16.15 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | P6P XBB.1.16.15 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | L45L XBB.1.16.15 |
| intergenic | Q58Q XBB.1.16.15 |
| intergenic | T115T XBB.1.16.15 |
| intergenic | G129G XBB.1.16.15 |
| intergenic | P168S XBB.1.16.15 |
| intergenic | S194P XBB.1.16.15 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | A211S XBB.1.16.15 |
| intergenic | S318S XBB.1.16.15 |
| intergenic | T362K XBB.1.16.15 |
| intergenic | E367Q XBB.1.16.15 |
| intergenic | D371D XBB.1.16.15 |
| intergenic | A381A XBB.1.16.15 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15 |
| intergenic | g.A29700G XBB.1.42.1,XBB.1.16.15 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGT29734C XBB.1.16.15 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGT29734T XBB.1.16.15 |
| intergenic | g.-187delA XBB.1.9.2 |
| intergenic | g.C-126T XBB.1.9.2 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2 |
| ORF1a | D33Y / NSP1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | H81R XBB.1.9.2 |
| intergenic | V86I XBB.1.9.2 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | D139N XBB.1.9.2 |
| intergenic | L140L XBB.1.9.2 |
| intergenic | K141_F143del GK.1.1,XBB.1.42.1,XBB.1.9.2 |
| intergenic | D144D XBB.1.9.2 |
| intergenic | Y241Y XBB.1.9.2 |
| intergenic | T265I XBB.1.9.2 |
| intergenic | T265T XBB.1.9.2 |
| intergenic | V274L XBB.1.9.2 |
| intergenic | S279S XBB.1.9.2 |
| ORF1a | M315T / NSP2 |
| ORF1a | C316F / NSP2 |
| intergenic | C316F XBB.1.9.2 |
| ORF1a | D324A / NSP2 |
| intergenic | G334G XBB.1.16.15,XBB.1.9.2 |
| intergenic | T346I GK.1,XBB.1.9.2 |
| intergenic | T350I XBB.1.9.2 |
| intergenic | N389N XBB.1.9.2 |
| intergenic | R398R XBB.1.9.2 |
| intergenic | L450I XBB.1.9.2 |
| intergenic | A478A XBB.1.9.2 |
| ORF1a | N522S / NSP2 |
| intergenic | N522S XBB.1.9.2 |
| ORF1a | E539K / NSP2 |
| intergenic | E539K XBB.1.9.2 |
| intergenic | F548S XBB.1.9.2 |
| intergenic | T554I XBB.1.9.2 |
| intergenic | L624F XBB.1.9.2 |
| intergenic | T708I XBB.1.9.2 |
| intergenic | G728C XBB.1.9.2 |
| ORF1a | L752L / NSP2 |
| intergenic | L752L XBB.1.9.2 |
| intergenic | A773A XBB.1.9.2 |
| intergenic | K798K XBB.1.9.2 |
| ORF1a | D828N / NSP3 |
| intergenic | D828N XBB.1.9.2 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | V879V XBB.1.9.2 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | P971L XBB.1.9.2 |
| intergenic | V1057F XBB.1.9.2 |
| intergenic | S1106S XBB.1.9.2 |
| ORF1a | E1244E / NSP3 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| ORF1a | S1427S / NSP3 |
| intergenic | S1427S XBB.1.9.2 |
| intergenic | T1542I XBB.1.9.2 |
| ORF1a | G1548G / NSP3 |
| intergenic | G1548G XBB.1.9.2 |
| intergenic | F1594F XBB.1.9.2 |
| intergenic | E1630E XBB.1.9.2 |
| intergenic | A1670V XBB.1.9.2 |
| ORF1a | A1712A / NSP3 |
| intergenic | A1712A XBB.1.9.2 |
| intergenic | N1719N XBB.1.9.2 |
| intergenic | Q1759R XBB.1.9.2 |
| intergenic | G1819S EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2 |
| intergenic | P1921Q XBB.1.9.2 |
| intergenic | T1945A XBB.1.9.2 |
| intergenic | K1980R XBB.1.9.2 |
| intergenic | L2044L XBB.1.9.2 |
| intergenic | S2048S XBB.1.9.2 |
| ORF1a | A2097S / NSP3 |
| intergenic | L2119F XBB.1.9.2 |
| intergenic | L2122F GK.1.1,XBB.1.9.2 |
| intergenic | A2128S XBB.1.9.2 |
| intergenic | P2134H XBB.1.9.2 |
| intergenic | A2142A XBB.1.9.2 |
| intergenic | P2260H XBB.1.9.2 |
| intergenic | S2273S XBB.1.9.2 |
| intergenic | T2306T XBB.1.9.2 |
| intergenic | Y2435Y XBB.1.9.2 |
| ORF1a | I2490V / NSP3 |
| intergenic | I2490V XBB.1.9.2 |
| ORF1a | K2497N / NSP3 |
| intergenic | K2497N XBB.1.9.2 |
| ORF1a | N2498N / NSP3 |
| intergenic | N2498N XBB.1.9.2 |
| intergenic | N2523N XBB.1.42.1,XBB.1.9.2 |
| intergenic | L2609F XBB.1.9.2 |
| intergenic | V2629I XBB.1.9.2 |
| ORF1a | F2641V / NSP3 |
| intergenic | F2641V XBB.1.9.2 |
| intergenic | T2777_L2778del XBB.1.9.2 |
| intergenic | V2865V XBB.1.9.2 |
| intergenic | T2872M XBB.1.9.2 |
| intergenic | I2895I XBB.1.9.2 |
| intergenic | T2906I XBB.1.9.2 |
| intergenic | P2929S XBB.1.9.2 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | I3052V XBB.1.9.2 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| ORF1a | C3059Y / NSP4 |
| intergenic | N3081N XBB.1.9.2 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | I3257I XBB.1.9.2 |
| ORF1a | T3287T / NSP5 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | V3349I XBB.1.9.2 |
| intergenic | K3353R XBB.1.9.2 |
| intergenic | R3368R GK.1.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | F3397F XBB.1.9.2 |
| ORF1a | C3419S / NSP5 |
| intergenic | C3419S XBB.1.9.2 |
| intergenic | V3420V XBB.1.9.2 |
| ORF1a | V3496M / NSP5 |
| intergenic | A3497A XBB.1.16.15,XBB.1.9.2 |
| intergenic | Y3502Y XBB.1.9.2 |
| intergenic | A3523V XBB.1.9.2 |
| intergenic | C3563C XBB.1.9.2 |
| intergenic | L3606F EG.5.1.8,GK.1.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2 |
| ORF1a | P3613A / NSP6 |
| intergenic | P3613A XBB.1.9.2 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | F3770F EG.5.1.6,XBB.1.9.2 |
| intergenic | R3802R XBB.1.9.2 |
| intergenic | D3897D XBB.1.16.15,XBB.1.9.2 |
| intergenic | S3920S XBB.1.9.2 |
| intergenic | A3943A XBB.1.9.2 |
| ORF1a | K4069R / NSP8 |
| intergenic | T4090I XBB.1.9.2 |
| ORF1a | E4143E / NSP9 |
| intergenic | E4143E XBB.1.9.2 |
| intergenic | T4161I XBB.1.9.2 |
| intergenic | T4175I EG.5.1.8,HK.1,BA.2.86.1,GK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | S4398S XBB.1.9.2 |
| ORF1b | A4438S / NSP12 |
| intergenic | A4438S XBB.1.9.2 |
| intergenic | D4545G XBB.1.9.2 |
| ORF1b | W4554C / NSP12 |
| intergenic | W4554C XBB.1.9.2 |
| intergenic | Y4686Y XBB.1.42.1,XBB.1.9.2 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| ORF1b | S4717S / NSP12 |
| intergenic | K4803K XBB.1.9.2 |
| intergenic | N5003N XBB.1.9.2 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | V5092I XBB.1.9.2 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | T5195I XBB.1.9.2 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | Y5276Y EG.5.1.6,XBB.1.9.2 |
| intergenic | L5287L XBB.1.9.2 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | P5371P EG.5.1.6,XBB.1.9.2 |
| intergenic | N5375N XBB.1.9.2 |
| intergenic | A5432A XBB.1.9.2 |
| ORF1b | K5455K / NSP13 |
| intergenic | E5466E XBB.1.9.2 |
| intergenic | N5501N XBB.1.9.2 |
| intergenic | Y5522Y XBB.1.9.2 |
| intergenic | T5538T EG.5.1.8,HK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2 |
| intergenic | Y5548Y XBB.1.9.2 |
| intergenic | C5633C XBB.1.9.2 |
| ORF1b | A5703S / NSP13 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | L5762L XBB.1.9.2 |
| intergenic | K5784R XBB.1.9.2 |
| ORF1b | K5801K / NSP13 |
| intergenic | K5801K XBB.1.9.2 |
| intergenic | T5805M XBB.1.9.2 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | I5967V XBB.1.16.15,XBB.1.9.2 |
| intergenic | R6023I XBB.1.9.2 |
| intergenic | P6067L XBB.1.9.2 |
| intergenic | P6076P EG.5.1.8,HK.1,BA.2.86.1,EG.5.1.6,XBB.1.9.2 |
| intergenic | D6097D XBB.1.9.2 |
| intergenic | P6128L XBB.1.9.2 |
| intergenic | A6139A XBB.1.9.2 |
| intergenic | C6141C XBB.1.9.2 |
| intergenic | G6157G XBB.1.9.2 |
| intergenic | S6180S XBB.1.9.2 |
| ORF1b | H6208N / NSP14 |
| intergenic | H6208N XBB.1.9.2 |
| intergenic | N6333N XBB.1.9.2 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | H6466Y XBB.1.9.2 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | T6566M XBB.1.9.2 |
| intergenic | T6572T XBB.1.9.2 |
| intergenic | D6584D XBB.1.9.2 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| ORF1b | D6897D / NSP16 |
| intergenic | L6981L XBB.1.9.2 |
| ORF1b | A6986T / NSP16 |
| intergenic | A6997A XBB.1.9.2 |
| intergenic | G7063S XBB.1.9.2 |
| intergenic | N7084N XBB.1.9.2 |
| intergenic | L5F GK.1.1,XBB.1.9.2 |
| intergenic | Q14H XBB.1.9.2 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | D40D XBB.1.9.2 |
| intergenic | Q52H EG.5.1.8,EG.5.1.6,XBB.1.9.2 |
| intergenic | G75V XBB.1.9.2 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | G142fs EG.5.1.8,FY.4.1.1,GK.1.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2 |
| intergenic | H146H XBB.1.9.2 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | L216F BA.2.86.1,GK.2.1,XBB.1.9.2 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | T286T XBB.1.9.2 |
| intergenic | F306F EG.5.1.8,HK.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2 |
| intergenic | I312I JE.1,XBB.1.9.2 |
| intergenic | C336C XBB.1.9.2 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| S | A411T XBB.1.9.2 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | A475A XBB.1.9.2 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.9.2 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | E583Q GK.1,XBB.1.9.2 |
| intergenic | E583D GK.1.1,XBB.1.9.2 |
| intergenic | T588I XBB.1.9.2 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2 |
| intergenic | R646H XBB.1.9.2 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2 |
| intergenic | P715P EG.5.1.6,XBB.1.9.2 |
| intergenic | L752F XBB.1.9.2 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | K825K XBB.1.9.2 |
| S | K825K XBB.1.9.2 |
| intergenic | D848D XBB.1.9.2 |
| intergenic | A852S XBB.1.9.2 |
| intergenic | D867D XBB.1.9.2 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | A1016V XBB.1.9.2 |
| S | A1016V XBB.1.9.2 |
| intergenic | H1101H GK.1,XBB.1.42.1,XBB.1.9.2 |
| intergenic | V1122L XBB.1.9.2 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | K1149K XBB.1.9.2 |
| intergenic | N1178N GK.1.1,XBB.1.9.2 |
| intergenic | D1260E XBB.1.9.2 |
| intergenic | V1264L XBB.1.9.2 |
| intergenic | M5T XBB.1.9.2 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | A23V XBB.1.9.2 |
| intergenic | V29L XBB.1.9.2 |
| intergenic | L41L XBB.1.9.2 |
| intergenic | S60F XBB.1.9.2 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | F105F XBB.1.9.2 |
| intergenic | M125I XBB.1.9.2 |
| intergenic | C148C XBB.1.9.2 |
| intergenic | Y215C XBB.1.9.2 |
| ORF3a | Y215C XBB.1.9.2 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | P240S XBB.1.9.2 |
| intergenic | D250N XBB.1.9.2 |
| ORF3a | D250N XBB.1.9.2 |
| intergenic | T269M XBB.1.9.2 |
| intergenic | T271I XBB.1.9.2 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | F23F XBB.1.9.2 |
| E | N66K XBB.1.9.2 |
| intergenic | A2A XBB.1.9.2 |
| intergenic | K15N XBB.1.9.2 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | M91L XBB.1.9.2 |
| M | M91L XBB.1.9.2 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | L181L GK.1.1,XBB.1.9.2 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | g.C-5T JE.1,XBB.1.9.2 |
| intergenic | G38G EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2 |
| intergenic | L56fs XBB.1.9.2 |
| ORF7a | L56fs XBB.1.9.2 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | F3S XBB.1.9.2 |
| ORF8 | F3S XBB.1.9.2 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | V13L XBB.1.9.2 |
| intergenic | P36P XBB.1.9.2 |
| intergenic | P38L XBB.1.9.2 |
| intergenic | S43F XBB.1.9.2 |
| intergenic | A55V XBB.1.9.2 |
| intergenic | P70P XBB.1.9.2 |
| intergenic | P85S XBB.1.9.2 |
| intergenic | S97G XBB.1.9.2 |
| ORF8 | S97G XBB.1.9.2 |
| intergenic | D113D XBB.1.9.2 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | P20P XBB.1.9.2 |
| intergenic | D22G XBB.1.9.2 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | T49I XBB.1.9.2 |
| intergenic | F53F GK.1.1,XBB.1.9.2 |
| intergenic | Q58Q XBB.1.16.15,XBB.1.9.2 |
| N | P67H XBB.1.9.2 |
| intergenic | P80Q XBB.1.9.2 |
| intergenic | F110F GK.1.1,XBB.1.42.1,XBB.1.9.2 |
| intergenic | P122H XBB.1.9.2 |
| N | P122H XBB.1.9.2 |
| intergenic | P142S XBB.1.9.2 |
| intergenic | I146I XBB.1.9.2 |
| intergenic | RG203KR GK.2.1,XBB.1.9.2 |
| intergenic | A211T XBB.1.9.2 |
| intergenic | L219F XBB.1.9.2 |
| intergenic | G287G GK.1.1,EG.5.1.6,XBB.1.9.2 |
| intergenic | G321S XBB.1.9.2 |
| N | I351V XBB.1.9.2 |
| intergenic | D371D XBB.1.16.15,XBB.1.9.2 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | F7F XBB.1.9.2 |
| intergenic | g.A29684G XBB.1.9.2 |
| intergenic | g.A29695G XBB.1.9.2 |
| intergenic | g.A29700G XBB.1.42.1,XBB.1.16.15,XBB.1.9.2 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2 |
| intergenic | g.C-36T EG.5.1.4 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | R24C XBB.1.42.1,EG.5.1.4 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | A79V XBB.1.16.15,EG.5.1.4 |
| intergenic | H81H EG.5.1.4 |
| intergenic | M85_E87delinsK EG.5.1.4 |
| intergenic | E91A EG.5.1.4 |
| intergenic | L92F EG.5.1.4 |
| intergenic | V121I EG.5.1.4 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | L320L EG.5.1.4 |
| intergenic | R398C XBB.1.42.1,EG.5.1.4 |
| intergenic | G400S EG.5.1.4 |
| intergenic | F548L EG.5.1.4 |
| intergenic | E673V EG.5.1.4 |
| intergenic | A690V EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4 |
| intergenic | V823I EG.5.1.4 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | V868L EG.5.1.4 |
| intergenic | A872A EG.5.1.4 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | D930N EG.5.1.4 |
| intergenic | S944L GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,EG.5.1.4 |
| intergenic | E961E EG.5.1.4 |
| intergenic | G1155C EG.5.1.4 |
| intergenic | Y1174Y EG.5.1.4 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | H1381Y EG.5.1.4 |
| intergenic | P1390P EG.5.1.4 |
| intergenic | G1819S EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4 |
| intergenic | Y1831Y EG.5.1.4 |
| intergenic | L1884L EG.5.1.4 |
| intergenic | Y1906Y EG.5.1.4 |
| intergenic | A2033A EG.5.1.4 |
| intergenic | T2124I EG.5.1.4 |
| intergenic | S2151N EG.5.1.4 |
| intergenic | R2159W EG.5.1.4 |
| intergenic | S2188F EG.5.1.4 |
| intergenic | T2283I EG.5.1.4 |
| intergenic | S2389S EG.5.1.4 |
| intergenic | T2495I EG.5.1.8,EG.5.1.4 |
| intergenic | E2653K EG.5.1.4 |
| intergenic | M2674I EG.5.1.4 |
| intergenic | N2708N EG.5.1.4 |
| intergenic | P2792S EG.5.1.4 |
| intergenic | F2802L EG.5.1.4 |
| intergenic | D2835Y EG.5.1.4 |
| intergenic | P2929P EG.5.1.4 |
| intergenic | V2955V EG.5.1.4 |
| intergenic | N3007N EG.5.1.4 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | I3055I EG.5.1.8,BA.2.86.1,EG.5.1.4 |
| intergenic | A3061A EG.5.1.4 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | F3100F EG.5.1.4 |
| intergenic | A3143V EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4 |
| intergenic | L3198I EG.5.1.4 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | H3233Y EG.5.1.4 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | A3392V EG.5.1.4 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | A3523A EG.5.1.4 |
| intergenic | S3530S EG.5.1.4 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | F3785F EG.5.1.4 |
| intergenic | L3829L EG.5.1.4 |
| intergenic | T4175I EG.5.1.8,HK.1,BA.2.86.1,GK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | D4344D EG.5.1.4 |
| intergenic | D4547G EG.5.1.4 |
| intergenic | P4619P EG.5.1.4 |
| intergenic | R4641K EG.5.1.4 |
| intergenic | Y4686Y XBB.1.42.1,XBB.1.9.2,EG.5.1.4 |
| intergenic | V4691I EG.5.1.4 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | L4779L GK.1.1,EG.5.1.4 |
| intergenic | L4852L EG.5.1.4 |
| intergenic | I4858V EG.5.1.4 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | I5171L EG.5.1.4 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | L5230L EG.5.1.4 |
| intergenic | Y5279Y EG.5.1.4 |
| intergenic | L5283L EG.5.1.4 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | T5435I EG.5.1.4 |
| intergenic | L5456L EG.5.1.4 |
| intergenic | T5538T EG.5.1.8,HK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4 |
| intergenic | Y5541Y EG.5.1.6,XBB.1.42.1,EG.5.1.4 |
| intergenic | L5580L HK.1,EG.5.1.4 |
| intergenic | L5619I EG.5.1.4 |
| intergenic | D5668D EG.5.1.4 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | D5782D EG.5.1.4 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | L5905F EG.5.1.6,EG.5.1.4 |
| intergenic | I5967V XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | A6021V EG.5.1.4 |
| intergenic | T6022T EG.5.1.4 |
| intergenic | P6046S GK.1,EG.5.1.4 |
| intergenic | P6076P EG.5.1.8,HK.1,BA.2.86.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4 |
| intergenic | D6097D XBB.1.9.2,EG.5.1.4 |
| intergenic | Y6160H EG.5.1.4 |
| intergenic | A6232T EG.5.1.4 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | S6375N EG.5.1.4 |
| intergenic | T6485I EG.5.1.4 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | A6623A GK.1.1,EG.5.1.4 |
| intergenic | D6787D EG.5.1.4 |
| intergenic | K6958R HK.1,GK.2.1,JE.1,EG.5.1.4 |
| intergenic | R7085I EG.5.1.4 |
| intergenic | L5F GK.1.1,XBB.1.9.2,EG.5.1.4 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | L24_A27delinsS EG.5.1.4 |
| intergenic | Q23_A27delinsKS EG.5.1.4 |
| intergenic | Q52H EG.5.1.8,EG.5.1.6,XBB.1.9.2,EG.5.1.4 |
| intergenic | S60S EG.5.1.4 |
| intergenic | V70F EG.5.1.4 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | G142D EG.5.1.8,FY.4.1.1,EG.5.1.6,EG.5.1.4 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | F306F EG.5.1.8,HK.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | LF455FL EG.5.1.8,HK.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,EG.5.1.4 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | Q493L EG.5.1.4 |
| intergenic | G496S EG.5.1.4 |
| intergenic | QPTN498RPTY EG.5.1.4 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | P521S JE.1,XBB.1.16.15,EG.5.1.4 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | T618T EG.5.1.4 |
| intergenic | G639G EG.5.1.4 |
| intergenic | V642G EG.5.1.4 |
| intergenic | EH654KY EG.5.1.4 |
| intergenic | H655Y EG.5.1.4 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4 |
| intergenic | S704L FY.4.1.1,GK.1,GK.1.1,EG.5.1.4 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | V860I EG.5.1.4 |
| intergenic | A890A EG.5.1.4 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | N978N EG.5.1.4 |
| S | N978N EG.5.1.4 |
| intergenic | G1035G EG.5.1.4 |
| intergenic | N1134S EG.5.1.4 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | D1153G EG.5.1.4 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | D22Y EG.5.1.4 |
| intergenic | Q57H EG.5.1.4 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | T89I EG.5.1.8,GK.1.1,EG.5.1.4 |
| intergenic | L106F EG.5.1.4 |
| intergenic | Y107H EG.5.1.4 |
| intergenic | L115S EG.5.1.4 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | P240L EG.5.1.4 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | V47L EG.5.1.4 |
| intergenic | V58F EG.5.1.4 |
| intergenic | P71L EG.5.1.4 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | L56L EG.5.1.4 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | Y71Y GK.1.1,EG.5.1.4 |
| intergenic | G78C EG.5.1.4 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | Y20H EG.5.1.4 |
| intergenic | G38G EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4 |
| intergenic | A55V EG.5.1.4 |
| intergenic | F87F EG.5.1.4 |
| intergenic | L116L EG.5.1.4 |
| intergenic | A15S GK.1.1,EG.5.1.4 |
| intergenic | 19 EG.5.1.4 |
| intergenic | L18L EG.5.1.4 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | H17H EG.5.1.4 |
| intergenic | V62V EG.5.1.4 |
| intergenic | E64G EG.5.1.4 |
| intergenic | F120fs EG.5.1.4 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | P162P EG.5.1.4 |
| intergenic | A173V GK.1.1,EG.5.1.4 |
| intergenic | RG203KR GK.2.1,XBB.1.9.2,EG.5.1.4 |
| intergenic | H300Y EG.5.1.4 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | A419A EG.5.1.4 |
| intergenic | S23F EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4 |
| intergenic | N25N GK.1,EG.5.1.4 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAC EG.5.1.8,EG.5.1.4 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAT EG.5.1.8,EG.5.1.4 |
| intergenic | g.C-222T GJ.1.2 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | g.CGTCC-25_-21TGTCT GJ.1.2 |
| intergenic | g.C-12T GJ.1.2 |
| intergenic | Q22H GJ.1.2 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | V84A GJ.1.2 |
| intergenic | Y97Y EG.5.1.8,GJ.1.2 |
| intergenic | A117T GJ.1.2 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | L149F GJ.1.2 |
| ORF1a | A181A / NSP2 |
| intergenic | R207C GJ.1.2 |
| intergenic | C231C GJ.1.2 |
| intergenic | H388Y GJ.1.2 |
| intergenic | A405A GJ.1.2 |
| intergenic | S428S JE.1,GJ.1.2 |
| intergenic | S443S GJ.1.2 |
| intergenic | L446F GJ.1.2 |
| intergenic | I473I HK.1,EG.5.1.6,XBB.1.42.1,GJ.1.2 |
| intergenic | T484I GJ.1.2 |
| intergenic | I523V GK.1,GJ.1.2 |
| intergenic | F536F GJ.1.2 |
| intergenic | L578L GJ.1.2 |
| intergenic | V627I GJ.1.2 |
| ORF1a | F651C / NSP2 |
| intergenic | F651C GJ.1.2 |
| ORF1a | G662V / NSP2 |
| ORF1a | A668E / NSP2 |
| intergenic | P748P GJ.1.2 |
| intergenic | A773A XBB.1.9.2,GJ.1.2 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | H919Y GJ.1.2 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | D992D GJ.1.2 |
| intergenic | P1018L GJ.1.2 |
| intergenic | A1049V GJ.1.2 |
| intergenic | V1057I GJ.1.2 |
| intergenic | G1069E GJ.1.2 |
| intergenic | T1093I GJ.1.2 |
| intergenic | V1143I GJ.1.2 |
| intergenic | L1148L GJ.1.2 |
| intergenic | K1197K GJ.1.2 |
| intergenic | I1203I XBB.1.16.15,GJ.1.2 |
| intergenic | A1204V GJ.1.2 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | D1323D JE.1,GJ.1.2 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | P1497S GJ.1.2 |
| intergenic | V1535V GJ.1.2 |
| intergenic | L1546L GJ.1.2 |
| ORF1a | T1581R / NSP3 |
| intergenic | H1636H GJ.1.2 |
| intergenic | H1652H GJ.1.2 |
| intergenic | Y1700Y GJ.1.2 |
| intergenic | N1749N GJ.1.2 |
| intergenic | V1751V GJ.1.2 |
| ORF1a | Y1831Y / NSP3 |
| intergenic | Y1831Y EG.5.1.4,GJ.1.2 |
| intergenic | Y1868Y GJ.1.2 |
| intergenic | Y1873Y GJ.1.2 |
| ORF1a | D1893N / NSP3 |
| ORF1a | K1988K / NSP3 |
| intergenic | K2029K GJ.1.2 |
| intergenic | L2044L XBB.1.9.2,GJ.1.2 |
| ORF1a | N2082T / NSP3 |
| intergenic | N2082T GJ.1.2 |
| intergenic | G2091S JE.1,GJ.1.2 |
| intergenic | H2092H HK.1,GK.2.1,GJ.1.2 |
| intergenic | M2096V GJ.1.2 |
| intergenic | L2127L GJ.1.2 |
| intergenic | N2155N GJ.1.2 |
| intergenic | I2244T GJ.1.2 |
| intergenic | C2282C GJ.1.2 |
| intergenic | T2283I EG.5.1.4,GJ.1.2 |
| intergenic | S2303F GJ.1.2 |
| intergenic | T2306T XBB.1.9.2,GJ.1.2 |
| ORF1a | F2358F / NSP3 |
| intergenic | Y2391Y GJ.1.2 |
| intergenic | I2490V XBB.1.9.2,GJ.1.2 |
| intergenic | L2518L JE.1,XBB.1.16.15,GJ.1.2 |
| intergenic | K2555K GJ.1.2 |
| intergenic | A2584V GK.1,GJ.1.2 |
| intergenic | R2875C GJ.1.2 |
| intergenic | H2986H GJ.1.2 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | A3143V EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,GJ.1.2 |
| intergenic | R3163K GJ.1.2 |
| intergenic | S3171S GJ.1.2 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | D3222N GJ.1.2 |
| ORF1a | S3244T / NSP4 |
| intergenic | S3244T GJ.1.2 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| ORF1a | T3289T / NSP5 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | T3356I GJ.1.2 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | P3395Y GJ.1.2 |
| intergenic | F3397F XBB.1.9.2,GJ.1.2 |
| intergenic | D3450D GJ.1.2 |
| intergenic | L3606F EG.5.1.8,GK.1.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,GJ.1.2 |
| ORF1a | M3621I / NSP6 |
| intergenic | M3621I GJ.1.2 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | V3721V GJ.1.2 |
| intergenic | T3741T GJ.1.2 |
| intergenic | F3769F GJ.1.2 |
| intergenic | F3785F EG.5.1.4,GJ.1.2 |
| ORF1a | T3807T / NSP6 |
| intergenic | T3807T GJ.1.2 |
| intergenic | C3867C GJ.1.2 |
| intergenic | L3951L GJ.1.2 |
| intergenic | T4010T GJ.1.2 |
| intergenic | L4040L GJ.1.2 |
| intergenic | T4129I GK.1,GJ.1.2 |
| intergenic | T4158T GJ.1.2 |
| intergenic | C4163C GJ.1.2 |
| intergenic | I4205V JE.1,GJ.1.2 |
| intergenic | L4237I GJ.1.2 |
| intergenic | L4252L GJ.1.2 |
| ORF1a | A4277T / NSP10 |
| intergenic | H4301H GJ.1.2 |
| intergenic | D4317E GJ.1.2 |
| ORF1b | D4547N / NSP12 |
| intergenic | Y4548C GJ.1.2 |
| intergenic | R4565C GJ.1.2 |
| intergenic | Y4567Y GJ.1.2 |
| intergenic | G4612G GJ.1.2 |
| intergenic | A4642T GJ.1.2 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| ORF1b | R4905R / NSP12 |
| intergenic | R4905R GJ.1.2 |
| intergenic | Q5053Q GJ.1.2 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| ORF1b | H5202H / NSP12 |
| intergenic | H5202H GJ.1.2 |
| intergenic | S5206S GJ.1.2 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | Q5335Q GJ.1.2 |
| intergenic | V5381I GJ.1.2 |
| intergenic | S5398P GJ.1.2 |
| intergenic | D5437D GJ.1.2 |
| intergenic | N5501N XBB.1.9.2,GJ.1.2 |
| ORF1b | V5511I / NSP13 |
| intergenic | V5511I JE.1,GJ.1.2 |
| intergenic | S5560N GJ.1.2 |
| intergenic | V5565M GJ.1.2 |
| intergenic | D5698D GJ.1.2 |
| ORF1b | A5703T / NSP13 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| ORF1b | K5832R / NSP13 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | D5955E GJ.1.2 |
| intergenic | T5956I GK.1.1,GJ.1.2 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,GJ.1.2 |
| intergenic | N5988N GJ.1.2 |
| intergenic | R6001R GJ.1.2 |
| intergenic | G6018G GJ.1.2 |
| intergenic | D6051D GJ.1.2 |
| intergenic | L6102F GJ.1.2 |
| intergenic | H6239H GJ.1.2 |
| intergenic | Q6279H GJ.1.2 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | H6466Y XBB.1.9.2,GJ.1.2 |
| intergenic | Y6540Y JE.1,GJ.1.2 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | F6628F GK.1.1,GJ.1.2 |
| intergenic | P6714S GJ.1.2 |
| intergenic | T6733T GJ.1.2 |
| intergenic | S6760S GJ.1.2 |
| intergenic | M6815I GJ.1.2 |
| intergenic | D6824D GJ.1.2 |
| intergenic | F6985F GJ.1.2 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2 |
| intergenic | V62L GJ.1.2 |
| intergenic | V62A GJ.1.2 |
| S | H66D GJ.1.2 |
| intergenic | V70V EG.5.1.6,GJ.1.2 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | T95I EG.5.1.8,GJ.1.2 |
| intergenic | A123A GJ.1.2 |
| intergenic | G142D EG.5.1.8,FY.4.1.1,EG.5.1.6,EG.5.1.4,GJ.1.2 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | K150I GJ.1.2 |
| intergenic | M153I GJ.1.2 |
| intergenic | KQ182NE JE.1,GJ.1.2 |
| intergenic | R190M GJ.1.2 |
| intergenic | I197T GJ.1.2 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | A222V GJ.1.2 |
| intergenic | D253G JE.1,GJ.1.2 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | R346T GJ.1.2 |
| intergenic | S349P GJ.1.2 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | D398D GJ.1.2 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | Y473Y GJ.1.2 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | ST477NR JE.1,XBB.1.42.1,XBB.1.16.15,GJ.1.2 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | P521S JE.1,XBB.1.16.15,EG.5.1.4,GJ.1.2 |
| intergenic | N542N GJ.1.2 |
| intergenic | N556N GJ.1.2 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | T618K GJ.1.2 |
| intergenic | P631P GJ.1.2 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2 |
| intergenic | Q675K GJ.1.2 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | S689I GJ.1.2 |
| intergenic | I692I XBB.1.16.15,GJ.1.2 |
| intergenic | A701V GJ.1.2 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | A845V GJ.1.2 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | V991V GJ.1.2 |
| intergenic | A1080A GJ.1.2 |
| intergenic | T1117I GK.1,GJ.1.2 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | D22D GJ.1.2 |
| intergenic | A23A GJ.1.2 |
| intergenic | F56F GJ.1.2 |
| intergenic | S60T GJ.1.2 |
| intergenic | T64I GJ.1.2 |
| intergenic | T64T GJ.1.2 |
| intergenic | S74F GJ.1.2 |
| intergenic | S74S EG.5.1.6,XBB.1.16.15,GJ.1.2 |
| intergenic | L95F GK.1,GJ.1.2 |
| intergenic | G100D GJ.1.2 |
| intergenic | L101L GJ.1.2 |
| intergenic | L106F EG.5.1.4,GJ.1.2 |
| intergenic | L108P GJ.1.2 |
| intergenic | V112V GJ.1.2 |
| intergenic | Y154Y GJ.1.2 |
| intergenic | F207F XBB.1.16.15,GJ.1.2 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | D238D GJ.1.2 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | g.T-25G GJ.1.2 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | A40S GJ.1.2 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | 113 GJ.1.2 |
| intergenic | F112F GJ.1.2 |
| intergenic | H125Y GJ.1.2 |
| intergenic | V9A GJ.1.2 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| ORF6 | L44P GJ.1.2 |
| intergenic | P57L GJ.1.2 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | A13V JE.1,GJ.1.2 |
| ORF7a | G38X GJ.1.2 |
| intergenic | T39I GJ.1.2 |
| intergenic | D51G GJ.1.2 |
| intergenic | D69D EG.5.1.6,GJ.1.2 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2 |
| intergenic | L32F GK.1.1,GJ.1.2 |
| ORF8 | F16fs GJ.1.2 |
| intergenic | Q18X GJ.1.2 |
| intergenic | I74I GJ.1.2 |
| intergenic | E106Q JE.1,GJ.1.2 |
| ORF8 | V117_I121delinsL GJ.1.2 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2 |
| intergenic | R36R GJ.1.2 |
| intergenic | F110F GK.1.1,XBB.1.42.1,XBB.1.9.2,GJ.1.2 |
| intergenic | Y111Y GJ.1.2 |
| intergenic | D128D GK.1,GK.1.1,GJ.1.2 |
| intergenic | T148T GJ.1.2 |
| intergenic | P199S GJ.1.2 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,GJ.1.2 |
| intergenic | A217A GJ.1.2 |
| intergenic | K249K GJ.1.2 |
| intergenic | H300R GJ.1.2 |
| N | H300R GJ.1.2 |
| intergenic | N345N GJ.1.2 |
| intergenic | I357V GJ.1.2 |
| intergenic | T362I GJ.1.2 |
| intergenic | Q409R GJ.1.2 |
| intergenic | S413R GJ.1.2 |
| intergenic | g.G29688C EG.5.1.8,GJ.1.2 |
| intergenic | g.G29706T JE.1,GJ.1.2 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAC EG.5.1.8,EG.5.1.4,GJ.1.2 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAT EG.5.1.8,EG.5.1.4,GJ.1.2 |
| intergenic | g.C-222T GJ.1.2,XCH.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | G7G XCH.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | M85del XCH.1 |
| intergenic | H110Y XCH.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | G137V XCH.1 |
| intergenic | R287G XCH.1 |
| intergenic | L454F XCH.1 |
| intergenic | L570L GK.1,GK.1.1,GK.2.1,XCH.1 |
| intergenic | L580L XCH.1 |
| intergenic | E633A XCH.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | E940G XCH.1 |
| intergenic | D981Y XCH.1 |
| intergenic | H1067Y XCH.1 |
| intergenic | L1144L XCH.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | V1629I XCH.1 |
| intergenic | N1922N XBB.1.16.15,XCH.1 |
| intergenic | G2091C XCH.1 |
| intergenic | T2124T XCH.1 |
| intergenic | S2433S GK.1,GK.1.1,GK.2.1,XCH.1 |
| intergenic | C2445C XCH.1 |
| intergenic | D2824D GK.1,GK.1.1,GK.2.1,XCH.1 |
| intergenic | R2985R XCH.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | A3143V EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | A3229A XCH.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | F3271F FY.4.1.1,XCH.1 |
| intergenic | N3291N GK.1.1,XBB.1.16.15,XCH.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | K3353R XBB.1.9.2,XCH.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | N3494N XCH.1 |
| intergenic | A3648A XCH.1 |
| intergenic | L3667L XCH.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | L3829F XBB.1.16.15,XCH.1 |
| intergenic | V3875I XCH.1 |
| intergenic | A4068S GK.1,GK.1.1,GK.2.1,XCH.1 |
| intergenic | L4149L XCH.1 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1 |
| intergenic | K4377N XCH.1 |
| intergenic | V4488I XCH.1 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | A5094A XCH.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | E5249E XCH.1 |
| intergenic | E5314E XCH.1 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1 |
| intergenic | D5531G XCH.1 |
| intergenic | A5620A GK.1,GK.1.1,GK.2.1,XCH.1 |
| intergenic | T5675I XBB.1.42.1,XCH.1 |
| intergenic | A5703A XCH.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | V5721V XCH.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,GJ.1.2,XCH.1 |
| intergenic | D5973D XCH.1 |
| intergenic | I6167I XCH.1 |
| intergenic | V6188V XCH.1 |
| intergenic | L6228L XCH.1 |
| intergenic | L6308L GK.2.1,XCH.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | V6634F XCH.1 |
| intergenic | P6878P XCH.1 |
| intergenic | R7014S XCH.1 |
| intergenic | Q7036H XCH.1 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | L24_A27delinsS GK.1.1,XCH.1 |
| intergenic | P25_A27del GK.1.1,XCH.1 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | H146Q HK.1,GK.2.1,XBB.1.42.1,XCH.1 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1 |
| intergenic | S305S XCH.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1 |
| intergenic | N354N GK.1,GK.1.1,GK.2.1,XCH.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | LF455FL EG.5.1.8,HK.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,EG.5.1.4,XCH.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | ST477NR JE.1,XBB.1.42.1,XBB.1.16.15,GJ.1.2,XCH.1 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | T573I GK.1.1,XCH.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1 |
| intergenic | Q677H GK.1,XCH.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | G700G XCH.1 |
| intergenic | S704L FY.4.1.1,GK.1,GK.1.1,EG.5.1.4,XCH.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | Q1201K XCH.1 |
| intergenic | C1247F XCH.1 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1 |
| intergenic | Q185H XCH.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | S68P XCH.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | T77T XCH.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1 |
| intergenic | L129L XCH.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | L116L XCH.1 |
| intergenic | T115I XCH.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1 |
| intergenic | S37S XCH.1 |
| intergenic | D128D GK.1,GK.1.1,GJ.1.2,XCH.1 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,GJ.1.2,XCH.1 |
| intergenic | W330L XCH.1 |
| intergenic | I337I XCH.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,XCH.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | g.CGTC-25_-22TGTT JD.1.1 |
| intergenic | g.CGTCC-25_-21TGTCT GJ.1.2,JD.1.1 |
| intergenic | R24C XBB.1.42.1,EG.5.1.4,JD.1.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | G82G JD.1.1 |
| intergenic | H110Y XCH.1,JD.1.1 |
| intergenic | N126N JD.1.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | K141_F143del GK.1.1,XBB.1.42.1,XBB.1.9.2,JD.1.1 |
| intergenic | P153S JD.1.1 |
| intergenic | C213R JD.1.1 |
| intergenic | P371P JD.1.1 |
| intergenic | E489K JD.1.1 |
| intergenic | K500K JD.1.1 |
| intergenic | G519S GK.1,GK.1.1,XBB.1.16.15,JD.1.1 |
| intergenic | R550C JD.1.1 |
| intergenic | V559M JD.1.1 |
| intergenic | V660I JD.1.1 |
| intergenic | A687T JD.1.1 |
| intergenic | L730L JD.1.1 |
| intergenic | V757V JD.1.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | D928Y JD.1.1 |
| intergenic | P971L XBB.1.9.2,JD.1.1 |
| intergenic | E1015K JD.1.1 |
| intergenic | Q1021H JD.1.1 |
| intergenic | N1094K JD.1.1 |
| intergenic | P1147P JD.1.1 |
| intergenic | R1170H JD.1.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | A1314V JD.1.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | T1426N JD.1.1 |
| intergenic | Y1489Y JD.1.1 |
| intergenic | L1523L JD.1.1 |
| intergenic | V1565V JD.1.1 |
| intergenic | G1591R JD.1.1 |
| intergenic | H1652R JD.1.1 |
| intergenic | T1682I JD.1.1 |
| intergenic | I1714V JD.1.1 |
| intergenic | L1853I JD.1.1 |
| intergenic | D1940G JD.1.1 |
| intergenic | V2019F JD.1.1 |
| intergenic | E2049A JD.1.1 |
| intergenic | L2119L JD.1.1 |
| intergenic | L2211L XBB.1.42.1,JD.1.1 |
| intergenic | F2215L JD.1.1 |
| intergenic | L2226L JD.1.1 |
| intergenic | L2271L JD.1.1 |
| intergenic | S2273F JD.1.1 |
| intergenic | T2274I JD.1.1 |
| intergenic | F2334F EG.5.1.8,JD.1.1 |
| intergenic | R2336K JD.1.1 |
| intergenic | S2433S GK.1,GK.1.1,GK.2.1,XCH.1,JD.1.1 |
| intergenic | S2535L JD.1.1 |
| intergenic | A2618D JD.1.1 |
| intergenic | D2693D JD.1.1 |
| intergenic | F2787F JD.1.1 |
| intergenic | T2859T JD.1.1 |
| intergenic | D2880N JD.1.1 |
| intergenic | A2994A JD.1.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | S3046S JD.1.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | A3061V JD.1.1 |
| intergenic | A3079A JD.1.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | F3100F EG.5.1.4,JD.1.1 |
| intergenic | Y3115Y JD.1.1 |
| intergenic | L3180L JD.1.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | A3357A GK.1.1,JD.1.1 |
| intergenic | P3362P JD.1.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | F3397F XBB.1.9.2,GJ.1.2,JD.1.1 |
| intergenic | D3439D XBB.1.16.15,JD.1.1 |
| intergenic | V3475I JD.1.1 |
| intergenic | T3506I JD.1.1 |
| intergenic | A3523V XBB.1.9.2,JD.1.1 |
| intergenic | A3625V JD.1.1 |
| intergenic | T3646I JD.1.1 |
| intergenic | 3676del JD.1.1 |
| intergenic | F3677del JD.1.1 |
| intergenic | S3675del JD.1.1 |
| intergenic | S3687L JD.1.1 |
| intergenic | T3750I JD.1.1 |
| intergenic | L3829F XBB.1.16.15,XCH.1,JD.1.1 |
| intergenic | I3898V JD.1.1 |
| intergenic | L3951F JD.1.1 |
| intergenic | T4031I JD.1.1 |
| intergenic | N4047N JD.1.1 |
| intergenic | N4082S JD.1.1 |
| intergenic | G4086S JD.1.1 |
| intergenic | P4120S JD.1.1 |
| intergenic | N4121D JD.1.1 |
| intergenic | T4161I XBB.1.9.2,JD.1.1 |
| intergenic | D4166D GK.2.1,JD.1.1 |
| intergenic | A4168A JD.1.1 |
| intergenic | N4173N JD.1.1 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1 |
| intergenic | V4216V JD.1.1 |
| intergenic | T4265I EG.5.1.6,JD.1.1 |
| intergenic | K4451N JD.1.1 |
| intergenic | D4454G JD.1.1 |
| intergenic | D4518D JD.1.1 |
| intergenic | D4532D JD.1.1 |
| intergenic | N4607N JD.1.1 |
| intergenic | A4642V JD.1.1 |
| intergenic | D4666D JD.1.1 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | P4720P JD.1.1 |
| intergenic | F4740F JD.1.1 |
| intergenic | V4790V JD.1.1 |
| intergenic | F4820F JD.1.1 |
| intergenic | A4946S JD.1.1 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | V5092I XBB.1.9.2,JD.1.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | T5195I XBB.1.9.2,JD.1.1 |
| intergenic | K5199K JD.1.1 |
| intergenic | Q5214H JD.1.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1 |
| intergenic | Y5541Y EG.5.1.6,XBB.1.42.1,EG.5.1.4,JD.1.1 |
| intergenic | A5620A GK.1,GK.1.1,GK.2.1,XCH.1,JD.1.1 |
| intergenic | S5625S JD.1.1 |
| intergenic | V5684V JD.1.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | G5724G XBB.1.16.15,JD.1.1 |
| intergenic | A5727A JD.1.1 |
| intergenic | I5756L JD.1.1 |
| intergenic | D5774D JD.1.1 |
| intergenic | L5779L JD.1.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | S5913N JD.1.1 |
| intergenic | T5923T JD.1.1 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | R6088C JD.1.1 |
| intergenic | P6128S GK.2.1,JD.1.1 |
| intergenic | D6183D JD.1.1 |
| intergenic | L6184L JD.1.1 |
| intergenic | V6241I JD.1.1 |
| intergenic | A6296V JD.1.1 |
| intergenic | 6309 JD.1.1 |
| intergenic | C6307C JD.1.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | V6408V JD.1.1 |
| intergenic | N6414S JD.1.1 |
| intergenic | V6462L JD.1.1 |
| intergenic | L6501L JD.1.1 |
| intergenic | G6528G JD.1.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | S6613I JD.1.1 |
| intergenic | R6658S JD.1.1 |
| intergenic | Y6682Y JD.1.1 |
| intergenic | F6715L JD.1.1 |
| intergenic | N6729N JD.1.1 |
| intergenic | T6737T JD.1.1 |
| intergenic | G6871S JD.1.1 |
| intergenic | I7005I JD.1.1 |
| intergenic | L5F GK.1.1,XBB.1.9.2,EG.5.1.4,JD.1.1 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | R21K JD.1.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,JD.1.1 |
| intergenic | F32F JD.1.1 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | G142D EG.5.1.8,FY.4.1.1,EG.5.1.6,EG.5.1.4,GJ.1.2,JD.1.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | G142fs EG.5.1.8,FY.4.1.1,GK.1.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,JD.1.1 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1 |
| intergenic | M153V JD.1.1 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1 |
| intergenic | T307T JD.1.1 |
| intergenic | K310K EG.5.1.8,JD.1.1 |
| intergenic | Q321Q JD.1.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | VG445PI JD.1.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | LF455FL EG.5.1.8,HK.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,EG.5.1.4,XCH.1,JD.1.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | I468T JD.1.1 |
| intergenic | AGST475VGNK JD.1.1 |
| intergenic | AGST475VSNK JD.1.1 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | E484V JD.1.1 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | D578D JD.1.1 |
| intergenic | E583D GK.1.1,XBB.1.9.2,JD.1.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | N679K JD.1.1 |
| intergenic | TN678IK JD.1.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | T778T JD.1.1 |
| intergenic | T791I JD.1.1 |
| intergenic | P812S JD.1.1 |
| intergenic | C840C XBB.1.16.15,JD.1.1 |
| intergenic | S937T JD.1.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | D979D JD.1.1 |
| intergenic | T1027T JD.1.1 |
| intergenic | D1084Y JD.1.1 |
| intergenic | R1107S JD.1.1 |
| intergenic | T1117I GK.1,GJ.1.2,JD.1.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | D1153H JD.1.1 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | S58G JD.1.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1 |
| intergenic | L73F JD.1.1 |
| intergenic | T89I EG.5.1.8,GK.1.1,EG.5.1.4,JD.1.1 |
| intergenic | Y141Y JD.1.1 |
| intergenic | S180F JD.1.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | F230F EG.5.1.6,JD.1.1 |
| intergenic | M260K JD.1.1 |
| intergenic | P267Q JD.1.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | Y42Y JD.1.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | L27L JD.1.1 |
| intergenic | A40A JD.1.1 |
| intergenic | L57L JD.1.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | I73M JD.1.1 |
| intergenic | A104V BA.2.86.1,JD.1.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1 |
| intergenic | H125Y GJ.1.2,JD.1.1 |
| intergenic | A12S JD.1.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | V29L JD.1.1 |
| intergenic | K85N JD.1.1 |
| intergenic | Y97Y JD.1.1 |
| intergenic | A105A JD.1.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | G8X JD.1.1 |
| intergenic | V13I XBB.1.16.15,JD.1.1 |
| intergenic | H17H EG.5.1.4,JD.1.1 |
| intergenic | D34A JD.1.1 |
| intergenic | P38fs JD.1.1 |
| intergenic | A65V GK.1,JD.1.1 |
| intergenic | S103L JD.1.1 |
| intergenic | Y111C JD.1.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | D3D JD.1.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1 |
| intergenic | T16T JD.1.1 |
| intergenic | P20P XBB.1.9.2,JD.1.1 |
| intergenic | E31_S33del JD.1.1 |
| intergenic | R32_G34del JD.1.1 |
| intergenic | P67T JD.1.1 |
| intergenic | F110F GK.1.1,XBB.1.42.1,XBB.1.9.2,GJ.1.2,JD.1.1 |
| intergenic | T141K JD.1.1 |
| intergenic | A173V GK.1.1,EG.5.1.4,JD.1.1 |
| intergenic | E174E JD.1.1 |
| intergenic | G200_G204delinsDLFSKR JD.1.1 |
| intergenic | RG203KR JD.1.1 |
| intergenic | G243S JD.1.1 |
| intergenic | V246V JD.1.1 |
| intergenic | A267S JD.1.1 |
| intergenic | L353L JD.1.1 |
| intergenic | T362K XBB.1.16.15,JD.1.1 |
| intergenic | Q406R JD.1.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1 |
| intergenic | g.G-5T JD.1.1 |
| intergenic | T12A JD.1.1 |
| intergenic | L37F JD.1.1 |
| intergenic | g.A29683T JD.1.1 |
| intergenic | g.A29716T JD.1.1 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,XCH.1,JD.1.1 |
| intergenic | g.G29779T JD.1.1 |
| intergenic | g.T29816C JD.1.1 |
| intergenic | g.C-222T GJ.1.2,XCH.1,HK.3 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | P80S HK.3 |
| intergenic | H110Y XCH.1,JD.1.1,HK.3 |
| intergenic | A117V HK.3 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | K141_F143del GK.1.1,XBB.1.42.1,XBB.1.9.2,JD.1.1,HK.3 |
| intergenic | V169V HK.3 |
| intergenic | D223D HK.3 |
| intergenic | Y229H HK.3 |
| intergenic | R232S HK.3 |
| intergenic | G268W HK.3 |
| intergenic | P309L XBB.1.16.15,HK.3 |
| intergenic | T340I HK.3 |
| intergenic | E342G HK.3 |
| intergenic | D466N HK.3 |
| intergenic | R542H HK.3 |
| intergenic | F548F HK.3 |
| intergenic | A599V HK.3 |
| intergenic | L628F HK.3 |
| intergenic | A690V EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,HK.3 |
| intergenic | S723S HK.3 |
| intergenic | V757V JD.1.1,HK.3 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | V879V XBB.1.9.2,HK.3 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | S944L GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,EG.5.1.4,HK.3 |
| intergenic | Q990L HK.3 |
| intergenic | G1068R HK.3 |
| intergenic | V1085F HK.3 |
| intergenic | G1155C EG.5.1.4,HK.3 |
| intergenic | V1211F HK.3 |
| intergenic | L1249L HK.3 |
| intergenic | D1258D HK.3 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | T1426T HK.3 |
| intergenic | N1442N HK.3 |
| intergenic | I1505I HK.3 |
| intergenic | P1541P HK.3 |
| intergenic | Q1593H HK.3 |
| intergenic | H1610Y HK.3 |
| intergenic | G1819S EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3 |
| intergenic | I1935I EG.5.1.6,HK.3 |
| intergenic | S2024S HK.3 |
| intergenic | A2033A EG.5.1.4,HK.3 |
| intergenic | E2063A HK.3 |
| intergenic | P2079L HK.3 |
| intergenic | A2080V HK.3 |
| intergenic | H2092H HK.1,GK.2.1,GJ.1.2,HK.3 |
| intergenic | L2211L XBB.1.42.1,JD.1.1,HK.3 |
| intergenic | N2222S HK.3 |
| intergenic | R2336S HK.3 |
| intergenic | L2364F HK.3 |
| intergenic | Y2489Y HK.3 |
| intergenic | S2500S HK.3 |
| intergenic | N2523N XBB.1.42.1,XBB.1.9.2,HK.3 |
| intergenic | E2617E HK.3 |
| intergenic | R2638R HK.3 |
| intergenic | P2685P HK.3 |
| intergenic | C2851C HK.3 |
| intergenic | I2858T HK.3 |
| intergenic | T2906N HK.3 |
| intergenic | Y2983Y HK.3 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | I3108V HK.3 |
| intergenic | A3143V EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,GJ.1.2,XCH.1,HK.3 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | Y3250Y HK.3 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | A3333V HK.3 |
| intergenic | K3353R XBB.1.9.2,XCH.1,HK.3 |
| intergenic | R3368R GK.1.1,XBB.1.16.15,XBB.1.9.2,HK.3 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | A3523V XBB.1.9.2,JD.1.1,HK.3 |
| intergenic | A3523A EG.5.1.4,HK.3 |
| intergenic | H3581H HK.3 |
| intergenic | L3606F EG.5.1.8,GK.1.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,GJ.1.2,HK.3 |
| intergenic | L3636L HK.3 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3 |
| intergenic | D3728D HK.3 |
| intergenic | A3730A HK.3 |
| intergenic | I3737V HK.3 |
| intergenic | L3930F HK.3 |
| intergenic | A3939V HK.3 |
| intergenic | T4175I EG.5.1.8,HK.1,BA.2.86.1,GK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,HK.3 |
| intergenic | G4201R HK.3 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3 |
| intergenic | L4252L GJ.1.2,HK.3 |
| intergenic | V4266V HK.3 |
| intergenic | P4353P HK.3 |
| ORF1b | D4455N / NSP12 |
| intergenic | D4455N HK.1,HK.3 |
| intergenic | S4470A HK.3 |
| intergenic | D4484N HK.3 |
| intergenic | V4566I HK.3 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | A4775T HK.3 |
| intergenic | A4791T HK.3 |
| intergenic | Y4875Y HK.3 |
| intergenic | Y4908Y HK.3 |
| intergenic | L4967L HK.3 |
| intergenic | H5005H HK.3 |
| intergenic | S5039R HK.3 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | E5121D HK.3 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | P5222P HK.3 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | A5258A HK.3 |
| intergenic | T5300I HK.3 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3 |
| intergenic | T5538T EG.5.1.8,HK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,HK.3 |
| intergenic | Y5541Y EG.5.1.6,XBB.1.42.1,EG.5.1.4,JD.1.1,HK.3 |
| intergenic | L5564L XBB.1.42.1,HK.3 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | R5733R HK.3 |
| intergenic | V5845V HK.3 |
| intergenic | I5849I HK.3 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | D5907D HK.3 |
| intergenic | H5944H HK.3 |
| intergenic | H5951Y HK.3 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | IP5967VL HK.3 |
| intergenic | P5971S HK.3 |
| intergenic | P6053S HK.3 |
| ORF1b | R6060K / NSP14 |
| intergenic | P6076P HK.3 |
| intergenic | P6076S HK.3 |
| intergenic | L6082F GK.1.1,HK.3 |
| intergenic | K6236N EG.5.1.6,HK.3 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | L6420L HK.3 |
| intergenic | T6482T HK.3 |
| intergenic | I6537I HK.3 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | V6573V HK.3 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | G6598D HK.3 |
| intergenic | H6686H HK.3 |
| intergenic | P6714S GJ.1.2,HK.3 |
| intergenic | V6772L HK.3 |
| intergenic | A6802A HK.3 |
| intergenic | I6838V HK.3 |
| intergenic | I7005I JD.1.1,HK.3 |
| intergenic | I7065I HK.3 |
| intergenic | L5F GK.1.1,XBB.1.9.2,EG.5.1.4,JD.1.1,HK.3 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,JD.1.1,HK.3 |
| intergenic | Q52H EG.5.1.8,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3 |
| intergenic | F65F HK.3 |
| intergenic | H66Y HK.3 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | N234N HK.3 |
| intergenic | L249F HK.3 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3 |
| intergenic | F306F EG.5.1.8,HK.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,HK.3 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3 |
| intergenic | A348S HK.3 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | LF455FL EG.5.1.8,HK.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,EG.5.1.4,XCH.1,JD.1.1,HK.3 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | Y508Y HK.3 |
| intergenic | R567R HK.3 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | P631P GJ.1.2,HK.3 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | A688T HK.3 |
| intergenic | I692I XBB.1.16.15,GJ.1.2,HK.3 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | T778T JD.1.1,HK.3 |
| intergenic | P809S HK.3 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | V1061V HK.3 |
| intergenic | A1070V EG.5.1.8,HK.3 |
| intergenic | F1103S HK.3 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | R1185C HK.3 |
| intergenic | G1219C XBB.1.16.15,HK.3 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | E19D HK.3 |
| intergenic | K21N HK.3 |
| intergenic | T34A HK.3 |
| intergenic | L52I HK.3 |
| intergenic | S60S HK.1,EG.5.1.6,HK.3 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3 |
| intergenic | W69L HK.3 |
| intergenic | A110V HK.3 |
| intergenic | V112V GJ.1.2,HK.3 |
| intergenic | R134H GK.1,HK.3 |
| intergenic | Y154Y GJ.1.2,HK.3 |
| intergenic | K192Q HK.3 |
| intergenic | Y212Y GK.1,XBB.1.42.1,HK.3 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | P240L EG.5.1.4,HK.3 |
| intergenic | G251V HK.3 |
| intergenic | T269T XBB.1.16.15,HK.3 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | L19I HK.3 |
| intergenic | A22A HK.3 |
| intergenic | Y42H HK.3 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | C33F HK.3 |
| intergenic | N41N HK.3 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | L87F HK.3 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3 |
| intergenic | I140I HK.3 |
| intergenic | D190D HK.3 |
| intergenic | L4L HK.3 |
| intergenic | V9A GJ.1.2,HK.3 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | I26V HK.3 |
| intergenic | P57P HK.3 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | I3T HK.3 |
| intergenic | Y20H EG.5.1.4,HK.3 |
| intergenic | G38G EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3 |
| intergenic | A79A HK.3 |
| intergenic | S98F HK.3 |
| intergenic | P99S HK.3 |
| intergenic | I107T HK.3 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | H42Y HK.3 |
| intergenic | H42H HK.3 |
| intergenic | G8X HK.3 |
| intergenic | M1fs HK.3 |
| intergenic | Q23Q XBB.1.16.15,HK.3 |
| intergenic | P30L HK.3 |
| intergenic | V62V EG.5.1.4,HK.3 |
| intergenic | A65V GK.1,JD.1.1,HK.3 |
| intergenic | A65A HK.3 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,HK.3 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3 |
| intergenic | T135I HK.3 |
| intergenic | A173V GK.1.1,EG.5.1.4,JD.1.1,HK.3 |
| intergenic | N192D HK.3 |
| intergenic | S197P HK.3 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,GJ.1.2,XCH.1,HK.3 |
| intergenic | L223L HK.3 |
| intergenic | D225D HK.3 |
| intergenic | I292I HK.3 |
| intergenic | Y298Y HK.3 |
| intergenic | T334I HK.3 |
| intergenic | A336V HK.3 |
| intergenic | T366I HK.3 |
| intergenic | Q389H HK.3 |
| intergenic | L395L HK.3 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3 |
| intergenic | S23F EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,HK.3 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,XCH.1,JD.1.1,HK.3 |
| intergenic | g.T29765C HK.3 |
| intergenic | g.C-156T FL.1.5.1 |
| intergenic | g.T-64C FL.1.5.1 |
| intergenic | g.C-44T XBB.1.16.15,FL.1.5.1 |
| intergenic | g.C-36T EG.5.1.4,FL.1.5.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | G82_V86del FL.1.5.1 |
| intergenic | K120N FL.1.5.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | K141_F143del GK.1.1,XBB.1.42.1,XBB.1.9.2,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | G146G FL.1.5.1 |
| intergenic | N160N FL.1.5.1 |
| intergenic | N178N FL.1.5.1 |
| intergenic | V186V FL.1.5.1 |
| intergenic | P193H FL.1.5.1 |
| intergenic | P197S FL.1.5.1 |
| intergenic | S216S FL.1.5.1 |
| intergenic | L219L FL.1.5.1 |
| ORF1a | T253T / NSP2 |
| intergenic | T253T FL.1.5.1 |
| intergenic | P276P FL.1.5.1 |
| intergenic | Y304Y FL.1.5.1 |
| intergenic | G345C FL.1.5.1 |
| intergenic | T350I XBB.1.9.2,FL.1.5.1 |
| intergenic | T403I FL.1.5.1 |
| intergenic | S443S GJ.1.2,FL.1.5.1 |
| intergenic | V488V FL.1.5.1 |
| intergenic | S549F FL.1.5.1 |
| intergenic | L552F FL.1.5.1 |
| intergenic | T554N FL.1.5.1 |
| intergenic | T602T FL.1.5.1 |
| intergenic | Y621Y FL.1.5.1 |
| intergenic | V649F FL.1.5.1 |
| intergenic | I659I EG.5.1.6,FL.1.5.1 |
| ORF1a | A776D / NSP2 |
| intergenic | D795D FL.1.5.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| ORF1a | D877G / NSP3 |
| intergenic | D877G FL.1.5.1 |
| intergenic | P892P FL.1.5.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | C936C FL.1.5.1 |
| ORF1a | L969H / NSP3 |
| intergenic | G993S FL.1.5.1 |
| ORF1a | I1023_N1026del / NSP3 |
| intergenic | H1113Y GK.1,XBB.1.16.15,FL.1.5.1 |
| intergenic | D1127D FL.1.5.1 |
| intergenic | G1155C EG.5.1.4,HK.3,FL.1.5.1 |
| intergenic | Y1174Y EG.5.1.4,FL.1.5.1 |
| intergenic | V1271I FL.1.5.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | L1313L FL.1.5.1 |
| intergenic | Y1337Y FL.1.5.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | I1360I FL.1.5.1 |
| intergenic | L1507F FL.1.5.1 |
| intergenic | G1548D FL.1.5.1 |
| intergenic | H1652H GJ.1.2,FL.1.5.1 |
| intergenic | E1724E FL.1.5.1 |
| intergenic | G1819S EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3,FL.1.5.1 |
| ORF1a | Y1836Y / NSP3 |
| intergenic | L1852L FL.1.5.1 |
| intergenic | F1907F FL.1.5.1 |
| ORF1a | D1933A / NSP3 |
| intergenic | D1933A FL.1.5.1 |
| intergenic | P1977P FL.1.5.1 |
| intergenic | S1978F FL.1.5.1 |
| intergenic | A2001T FL.1.5.1 |
| intergenic | S2022P FL.1.5.1 |
| intergenic | D2043N FL.1.5.1 |
| intergenic | D2060D EG.5.1.8,FL.1.5.1 |
| intergenic | W2232C EG.5.1.6,FL.1.5.1 |
| intergenic | M2259I FL.1.5.1 |
| intergenic | G2269D FL.1.5.1 |
| intergenic | L2298L FL.1.5.1 |
| intergenic | A2379V EG.5.1.8,FL.1.5.1 |
| intergenic | S2500S HK.3,FL.1.5.1 |
| intergenic | V2522I FL.1.5.1 |
| intergenic | D2525D HK.1,GK.1.1,FL.1.5.1 |
| intergenic | Y2560Y FL.1.5.1 |
| intergenic | A2618V FL.1.5.1 |
| intergenic | V2629V FL.1.5.1 |
| intergenic | A2701G FL.1.5.1 |
| intergenic | S2731G FL.1.5.1 |
| ORF1a | Q2772L / NSP4 |
| intergenic | Q2772L FL.1.5.1 |
| intergenic | F2780_V2783del FL.1.5.1 |
| intergenic | I2806I FL.1.5.1 |
| intergenic | T2823I FL.1.5.1 |
| intergenic | A2917A FL.1.5.1 |
| intergenic | T2967I FL.1.5.1 |
| intergenic | T2967T FL.1.5.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | A3061A EG.5.1.4,FL.1.5.1 |
| ORF1a | A3070V / NSP4 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | D3240D FL.1.5.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| ORF1a | M3428I / NSP5 |
| ORF1a | V3572M / NSP6 |
| intergenic | L3606F EG.5.1.8,GK.1.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,GJ.1.2,HK.3,FL.1.5.1 |
| intergenic | A3625V JD.1.1,FL.1.5.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1 |
| intergenic | L3694F FL.1.5.1 |
| intergenic | A3730A HK.3,FL.1.5.1 |
| intergenic | P3767S FL.1.5.1 |
| intergenic | L3828L FL.1.5.1 |
| intergenic | L3829F XBB.1.16.15,XCH.1,JD.1.1,FL.1.5.1 |
| ORF1a | F3838C / NSP6 |
| intergenic | D3897D XBB.1.16.15,XBB.1.9.2,FL.1.5.1 |
| intergenic | A3987A FL.1.5.1 |
| intergenic | K4039K FL.1.5.1 |
| intergenic | T4129I GK.1,GJ.1.2,FL.1.5.1 |
| intergenic | T4175I EG.5.1.8,HK.1,BA.2.86.1,GK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,HK.3,FL.1.5.1 |
| intergenic | 4206 FL.1.5.1 |
| intergenic | I4205I FL.1.5.1 |
| intergenic | 4238 FL.1.5.1 |
| intergenic | N4235N JE.1,FL.1.5.1 |
| intergenic | F4269F FL.1.5.1 |
| intergenic | M4390I FL.1.5.1 |
| intergenic | D4499N FL.1.5.1 |
| intergenic | D4545Y FL.1.5.1 |
| ORF1b | Q4576Q / NSP12 |
| ORF1b | Y4609Y / NSP12 |
| intergenic | Y4609Y FL.1.5.1 |
| intergenic | P4624S FL.1.5.1 |
| intergenic | H4648Y FL.1.5.1 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | F4820F JD.1.1,FL.1.5.1 |
| intergenic | Y4847Y JE.1,FL.1.5.1 |
| intergenic | V4887V FL.1.5.1 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | V5092V JE.1,FL.1.5.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | Y5259Y FL.1.5.1 |
| intergenic | N5303N FL.1.5.1 |
| intergenic | S5305L FL.1.5.1 |
| intergenic | F5348F FL.1.5.1 |
| intergenic | C5353C XBB.1.16.15,FL.1.5.1 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | A5434T FL.1.5.1 |
| intergenic | H5488Y FL.1.5.1 |
| intergenic | G5494G FL.1.5.1 |
| intergenic | L5500L FL.1.5.1 |
| intergenic | Y5541Y EG.5.1.6,XBB.1.42.1,EG.5.1.4,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | V5565M GJ.1.2,FL.1.5.1 |
| intergenic | A5703A XCH.1,FL.1.5.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| ORF1b | D5790Y / NSP13 |
| intergenic | D5790Y FL.1.5.1 |
| intergenic | A5833S FL.1.5.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| ORF1b | N5886N / NSP13 |
| intergenic | N5886N FL.1.5.1 |
| intergenic | G5942G FL.1.5.1 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| ORF1b | N5992D / NSP14 |
| intergenic | T6131T EG.5.1.8,FL.1.5.1 |
| intergenic | C6132C FL.1.5.1 |
| intergenic | T6175I XBB.1.42.1,FL.1.5.1 |
| intergenic | G6176C FL.1.5.1 |
| intergenic | T6218I FL.1.5.1 |
| intergenic | H6239H GJ.1.2,FL.1.5.1 |
| intergenic | Q6268Q FL.1.5.1 |
| intergenic | Y6317Y FL.1.5.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | Y6372Y FL.1.5.1 |
| ORF1b | A6396T / NSP14 |
| ORF1b | E6415D / NSP14 |
| intergenic | L6420L HK.3,FL.1.5.1 |
| intergenic | A6532V FL.1.5.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | T6566T FL.1.5.1 |
| intergenic | V6573V HK.3,FL.1.5.1 |
| intergenic | V6579F FL.1.5.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | S6599I FL.1.5.1 |
| intergenic | S6606F FL.1.5.1 |
| intergenic | L6614F XBB.1.42.1,FL.1.5.1 |
| intergenic | S6695I FL.1.5.1 |
| ORF1b | D6719G / NSP15 |
| intergenic | D6719G FL.1.5.1 |
| intergenic | I6721T FL.1.5.1 |
| intergenic | M6723I FL.1.5.1 |
| intergenic | C6742F JE.1,FL.1.5.1 |
| intergenic | L6848L EG.5.1.8,FL.1.5.1 |
| intergenic | N6899N FL.1.5.1 |
| intergenic | L6924L FL.1.5.1 |
| intergenic | C6952C FL.1.5.1 |
| intergenic | K6958R HK.1,GK.2.1,JE.1,EG.5.1.4,FL.1.5.1 |
| intergenic | R7014H FL.1.5.1 |
| intergenic | R7014N FL.1.5.1 |
| intergenic | H7023H FL.1.5.1 |
| ORF1b | I7069V / NSP16 |
| intergenic | N7095N FL.1.5.1 |
| intergenic | L5F GK.1.1,XBB.1.9.2,EG.5.1.4,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | F43F FL.1.5.1 |
| intergenic | D53D XBB.1.42.1,FL.1.5.1 |
| intergenic | L54L XBB.1.16.15,FL.1.5.1 |
| intergenic | H69Y EG.5.1.8,FL.1.5.1 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | G142D EG.5.1.8,FY.4.1.1,EG.5.1.6,EG.5.1.4,GJ.1.2,JD.1.1,FL.1.5.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | KQ182EE FL.1.5.1 |
| intergenic | Q183E FL.1.5.1 |
| intergenic | R190K FL.1.5.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | D215Y FL.1.5.1 |
| intergenic | Q218E FL.1.5.1 |
| intergenic | S221S FL.1.5.1 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | GD252VG FL.1.5.1 |
| intergenic | GD252VN FL.1.5.1 |
| intergenic | S256P FL.1.5.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | ST477NR JE.1,XBB.1.42.1,XBB.1.16.15,GJ.1.2,XCH.1,FL.1.5.1 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | S494P HK.1,FY.4.1.1,EG.5.1.6,FL.1.5.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | E554K BA.2.86.1,GK.1,FL.1.5.1 |
| intergenic | N556N GJ.1.2,FL.1.5.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | A672V FL.1.5.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | A701V GJ.1.2,FL.1.5.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | NRA764KRS FL.1.5.1 |
| intergenic | T768N FL.1.5.1 |
| intergenic | N777N FL.1.5.1 |
| intergenic | Q836K FL.1.5.1 |
| S | Q913Q FL.1.5.1 |
| intergenic | S939S FL.1.5.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | G1085A FL.1.5.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | M1229I FL.1.5.1 |
| intergenic | V1264L XBB.1.9.2,FL.1.5.1 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | T24I FL.1.5.1 |
| intergenic | A54V GK.1.1,FL.1.5.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | A99V FL.1.5.1 |
| intergenic | L106L HK.1,FL.1.5.1 |
| intergenic | R126M FL.1.5.1 |
| intergenic | D210Y FL.1.5.1 |
| ORF3a | L214L FL.1.5.1 |
| intergenic | T221I FL.1.5.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | E241D FL.1.5.1 |
| ORF3a | E241D XBB.1.5,FL.1.5.1 |
| intergenic | N257N FL.1.5.1 |
| intergenic | g.G-10T FL.1.5.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | I76I FL.1.5.1 |
| intergenic | I80F FL.1.5.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | N117N FL.1.5.1 |
| intergenic | L124L GK.1,FL.1.5.1 |
| intergenic | L138L FL.1.5.1 |
| intergenic | G202G FL.1.5.1 |
| ORF6 | F7Y FL.1.5.1 |
| intergenic | A12T FL.1.5.1 |
| intergenic | L15L FL.1.5.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | N34N FL.1.5.1 |
| intergenic | N47N FL.1.5.1 |
| intergenic | D53D FL.1.5.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | L5P FL.1.5.1 |
| intergenic | T14I FL.1.5.1 |
| intergenic | A79A HK.3,FL.1.5.1 |
| intergenic | F19L FL.1.5.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | A43V HK.1,GK.1.1,FL.1.5.1 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,FL.1.5.1 |
| intergenic | T11I GK.2.1,FL.1.5.1 |
| intergenic | T87I FL.1.5.1 |
| intergenic | F104S FL.1.5.1 |
| intergenic | Y105Y FL.1.5.1 |
| intergenic | F120F GK.1,GK.2.1,FL.1.5.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | P6P XBB.1.16.15,FL.1.5.1 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,HK.3,FL.1.5.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | E31_S33del JD.1.1,FL.1.5.1 |
| intergenic | R32_G34del JD.1.1,FL.1.5.1 |
| intergenic | G34G GK.2.1,FL.1.5.1 |
| intergenic | F66F FL.1.5.1 |
| intergenic | Y86Y FL.1.5.1 |
| intergenic | P122S FL.1.5.1 |
| N | Q163R FL.1.5.1 |
| intergenic | R185C FL.1.5.1 |
| intergenic | S193N FL.1.5.1 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,GJ.1.2,XCH.1,HK.3,FL.1.5.1 |
| N | A208G FL.1.5.1 |
| intergenic | S232N FL.1.5.1 |
| intergenic | Q281L FL.1.5.1 |
| intergenic | P302P FL.1.5.1 |
| intergenic | P326S FL.1.5.1 |
| intergenic | I337V FL.1.5.1 |
| intergenic | D341D FL.1.5.1 |
| intergenic | P365S FL.1.5.1 |
| intergenic | T366I HK.3,FL.1.5.1 |
| intergenic | P383L EG.5.1.6,FL.1.5.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | N22K FL.1.5.1 |
| intergenic | R24C FL.1.5.1 |
| intergenic | A28V XBB.1.42.1,FL.1.5.1 |
| intergenic | g.C29675A FL.1.5.1 |
| intergenic | g.G29690T FL.1.5.1 |
| intergenic | g.C29721T FL.1.5.1 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAC EG.5.1.8,EG.5.1.4,GJ.1.2,FL.1.5.1 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAT EG.5.1.8,EG.5.1.4,GJ.1.2,FL.1.5.1 |
| intergenic | g.C29769T FL.1.5.1 |
| intergenic | g.G29779T JD.1.1,FL.1.5.1 |
| intergenic | g.C-222T GJ.1.2,XCH.1,HK.3,EG.5.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| ORF1a | S17C / NSP1 |
| intergenic | R24C XBB.1.42.1,EG.5.1.4,JD.1.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | V56V EG.5.1 |
| intergenic | A79V XBB.1.16.15,EG.5.1.4 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | A138A EG.5.1 |
| intergenic | N188N EG.5.1 |
| intergenic | L198L EG.5.1 |
| intergenic | H234H EG.5.1 |
| ORF1a | K247R / NSP2 |
| intergenic | K247R EG.5.1 |
| intergenic | G268V EG.5.1 |
| intergenic | G268G EG.5.1 |
| ORF1a | L293P / NSP2 |
| intergenic | L293P EG.5.1 |
| intergenic | A339A EG.5.1 |
| intergenic | R398C XBB.1.42.1,EG.5.1.4 |
| intergenic | H417Y EG.5.1 |
| ORF1a | N470S / NSP2 |
| intergenic | I473I HK.1,EG.5.1.6,XBB.1.42.1,GJ.1.2 |
| intergenic | V488M EG.5.1 |
| intergenic | G519S GK.1,GK.1.1,XBB.1.16.15,JD.1.1,EG.5.1 |
| intergenic | R542C EG.5.1 |
| intergenic | S549S EG.5.1 |
| intergenic | I569T EG.5.1 |
| intergenic | A599V HK.3,EG.5.1 |
| intergenic | P626P GK.1.1,EG.5.1 |
| intergenic | L628F HK.3,EG.5.1 |
| intergenic | L642F GK.1,EG.5.1.6 |
| ORF1a | A656T / NSP2 |
| intergenic | C667S EG.5.1 |
| intergenic | K684K EG.5.1 |
| ORF1a | F685L / NSP2 |
| intergenic | F685L EG.5.1 |
| intergenic | A690V EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,HK.3,EG.5.1 |
| intergenic | T753I XBB.1.16.15,EG.5.1 |
| intergenic | L815L EG.5.1 |
| intergenic | V839V EG.5.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | D928D GK.1,EG.5.1 |
| ORF1a | D935D / NSP3 |
| intergenic | F941L EG.5.1 |
| intergenic | S944L GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,EG.5.1.4,HK.3 |
| ORF1a | D982G / NSP3 |
| intergenic | T987N EG.5.1 |
| ORF1a | T1022N / NSP3 |
| intergenic | T1022N EG.5.1 |
| intergenic | V1025V EG.5.1 |
| intergenic | P1054L EG.5.1 |
| intergenic | V1057I GJ.1.2,EG.5.1 |
| intergenic | A1078A EG.5.1 |
| intergenic | S1102G EG.5.1 |
| intergenic | L1130F EG.5.1.8,EG.5.1.6 |
| intergenic | G1155D EG.5.1 |
| ORF1a | V1187F / NSP3 |
| intergenic | E1192V EG.5.1 |
| intergenic | P1207P EG.5.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | L1441L GK.1,EG.5.1 |
| intergenic | A1473V EG.5.1 |
| intergenic | P1480L EG.5.1 |
| intergenic | D1513E EG.5.1 |
| intergenic | V1629V EG.5.1 |
| intergenic | C1744C EG.5.1 |
| intergenic | N1749N GJ.1.2,EG.5.1 |
| intergenic | V1765V EG.5.1 |
| intergenic | G1819S EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | S1857L EG.5.1.6,EG.5.1 |
| intergenic | P1950P EG.5.1 |
| intergenic | Y1972Y EG.5.1 |
| ORF1a | F2025F / NSP3 |
| intergenic | F2025F EG.5.1 |
| intergenic | P2046S GK.1,EG.5.1.6 |
| intergenic | V2052L EG.5.1 |
| intergenic | D2101D EG.5.1 |
| intergenic | H2125Y EG.5.1 |
| intergenic | Y2168Y EG.5.1 |
| intergenic | T2196T EG.5.1 |
| intergenic | A2249V EG.5.1 |
| intergenic | L2253L EG.5.1 |
| intergenic | Y2262H EG.5.1 |
| intergenic | A2279V EG.5.1 |
| intergenic | P2287L XBB.1.42.1,EG.5.1 |
| intergenic | D2299D EG.5.1 |
| intergenic | T2300T EG.5.1 |
| ORF1a | I2426I / NSP3 |
| intergenic | I2490I EG.5.1.6,EG.5.1 |
| intergenic | T2495I EG.5.1.8,EG.5.1.4 |
| intergenic | I2806V EG.5.1 |
| intergenic | N2847S EG.5.1 |
| intergenic | A2856V EG.5.1 |
| intergenic | R2875H EG.5.1 |
| intergenic | I2895I XBB.1.9.2,EG.5.1 |
| intergenic | T2906I XBB.1.9.2,EG.5.1 |
| intergenic | T2920T EG.5.1 |
| ORF1a | S2926C / NSP4 |
| intergenic | P2929L EG.5.1 |
| intergenic | V2996L EG.5.1 |
| intergenic | N3007N EG.5.1.4,EG.5.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | I3055I EG.5.1.8,BA.2.86.1,EG.5.1.4 |
| intergenic | C3059C EG.5.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | A3143V EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1 |
| ORF1a | E3188D / NSP4 |
| intergenic | E3188D EG.5.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | G3278S EG.5.1 |
| intergenic | N3291N GK.1.1,XBB.1.16.15,XCH.1,EG.5.1 |
| intergenic | D3297D EG.5.1 |
| intergenic | Y3300Y EG.5.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | L3321F EG.5.1 |
| intergenic | L3338L EG.5.1 |
| ORF1a | P3362P / NSP5 |
| intergenic | V3377V EG.5.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | F3397F XBB.1.9.2,GJ.1.2,JD.1.1,EG.5.1 |
| ORF1a | I3522L / NSP5 |
| intergenic | I3522L EG.5.1 |
| intergenic | T3579I EG.5.1 |
| intergenic | L3606F EG.5.1.8,GK.1.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,GJ.1.2,HK.3,FL.1.5.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | L3694F FL.1.5.1,EG.5.1 |
| intergenic | P3831P EG.5.1 |
| intergenic | L3900L EG.5.1 |
| intergenic | L3914L EG.5.1 |
| intergenic | N3928N EG.5.1 |
| intergenic | N3937S EG.5.1 |
| intergenic | N3937N EG.5.1 |
| intergenic | A4016V EG.5.1 |
| intergenic | D4020D EG.5.1 |
| intergenic | P4058P XBB.1.42.1,XBB.1.16.15,EG.5.1 |
| intergenic | N4082N EG.5.1 |
| intergenic | T4175I EG.5.1 |
| intergenic | TT4174II EG.5.1 |
| intergenic | T4175I EG.5.1.8,HK.1,BA.2.86.1,GK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,HK.3,FL.1.5.1 |
| intergenic | L4185L EG.5.1 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,EG.5.1 |
| intergenic | A4357V EG.5.1 |
| intergenic | A4357A EG.5.1 |
| intergenic | V4372V EG.5.1.6,EG.5.1 |
| intergenic | D4384D GK.2.1,EG.5.1 |
| ORF1b | D4455N / NSP12 |
| intergenic | D4455N HK.1,HK.3,EG.5.1 |
| intergenic | Y4472Y EG.5.1 |
| ORF1b | D4553G / NSP12 |
| intergenic | Y4567Y GJ.1.2,EG.5.1 |
| intergenic | V4582V EG.5.1 |
| intergenic | I4636M EG.5.1 |
| intergenic | Y4686Y XBB.1.42.1,XBB.1.9.2,EG.5.1.4 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| ORF1b | S4735S / NSP12 |
| intergenic | S4735S EG.5.1 |
| ORF1b | A4767T / NSP12 |
| intergenic | A4767T EG.5.1 |
| intergenic | L4779L GK.1.1,EG.5.1.4 |
| intergenic | C4787C EG.5.1 |
| intergenic | N4795N EG.5.1 |
| intergenic | F4820F JD.1.1,FL.1.5.1,EG.5.1 |
| intergenic | D4857D EG.5.1 |
| intergenic | R4947R EG.5.1 |
| intergenic | T4978T EG.5.1 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | E5136E EG.5.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | L5167L EG.5.1 |
| intergenic | Y5218Y EG.5.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | A5232A EG.5.1.8,XBB.1.16.15,EG.5.1 |
| intergenic | F5251F EG.5.1 |
| intergenic | L5283L EG.5.1.4,EG.5.1 |
| intergenic | N5303N FL.1.5.1,EG.5.1 |
| intergenic | C5332C EG.5.1.8,EG.5.1 |
| intergenic | Y5355Y EG.5.1 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | P5371P EG.5.1.6,XBB.1.9.2,EG.5.1 |
| intergenic | P5377S GK.2.1,EG.5.1 |
| intergenic | H5488Y FL.1.5.1,EG.5.1 |
| intergenic | T5538T EG.5.1.8,HK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,HK.3,EG.5.1 |
| intergenic | Y5541Y EG.5.1.6,XBB.1.42.1,EG.5.1.4,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| ORF1b | L5543L / NSP13 |
| intergenic | L5580L HK.1,EG.5.1.4 |
| intergenic | A5636A EG.5.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | K5784R XBB.1.9.2,EG.5.1 |
| intergenic | A5829D EG.5.1 |
| intergenic | G5862G EG.5.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| ORF1b | I5889I / NSP13 |
| intergenic | I5889I GK.1,EG.5.1 |
| intergenic | L5905F EG.5.1.6,EG.5.1.4 |
| intergenic | I5967V XBB.1.16.15,XBB.1.9.2,EG.5.1.4 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | P6046S GK.1,EG.5.1.4 |
| intergenic | V6050V EG.5.1 |
| intergenic | P6076P EG.5.1.8,HK.1,BA.2.86.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,EG.5.1 |
| intergenic | M6078I EG.5.1 |
| intergenic | D6097D XBB.1.9.2,EG.5.1.4 |
| intergenic | V6107I EG.5.1 |
| intergenic | P6128P EG.5.1 |
| intergenic | L6184L EG.5.1 |
| intergenic | V6188V XCH.1,EG.5.1 |
| intergenic | N6191D EG.5.1 |
| intergenic | V6241I JD.1.1,EG.5.1 |
| intergenic | P6252S EG.5.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | L6420L HK.3,FL.1.5.1,EG.5.1 |
| intergenic | A6511S EG.5.1 |
| ORF1b | A6560S / NSP15 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | T6566M XBB.1.9.2,EG.5.1 |
| ORF1b | V6583L / NSP15 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | A6623A GK.1.1,EG.5.1.4 |
| ORF1b | Q6660P / NSP15 |
| intergenic | Q6660P EG.5.1 |
| intergenic | M6661I EG.5.1 |
| intergenic | G6738S EG.5.1 |
| intergenic | Y6813Y EG.5.1 |
| intergenic | A6832V EG.5.1.6,EG.5.1 |
| intergenic | T6833I EG.5.1 |
| intergenic | S6872S EG.5.1 |
| intergenic | I6926V GK.1,EG.5.1 |
| intergenic | K6935K EG.5.1 |
| intergenic | K6958R HK.1,GK.2.1,JE.1,EG.5.1.4,FL.1.5.1 |
| intergenic | L5F GK.1.1,XBB.1.9.2,EG.5.1.4,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | T19I EG.5.1 |
| intergenic | T19L EG.5.1 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | T29I EG.5.1.8,EG.5.1 |
| intergenic | Q52H EG.5.1.8,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3,EG.5.1 |
| intergenic | F55F EG.5.1 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | S116S EG.5.1 |
| intergenic | G142D EG.5.1.8,FY.4.1.1,EG.5.1.6,EG.5.1.4,GJ.1.2,JD.1.1,FL.1.5.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | G142fs EG.5.1.8,FY.4.1.1,GK.1.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,JD.1.1 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,EG.5.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | D215Y FL.1.5.1,EG.5.1 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | S255F XBB.1.16.15,EG.5.1 |
| intergenic | A260D EG.5.1 |
| intergenic | G261V EG.5.1 |
| intergenic | A288S EG.5.1 |
| S | A288S EG.5.1 |
| intergenic | F306F EG.5.1.8,HK.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,HK.3,EG.5.1 |
| intergenic | T323T EG.5.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | N354H EG.5.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | D428D EG.5.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | LF455FL EG.5.1.8,HK.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,EG.5.1.4,XCH.1,JD.1.1,HK.3,EG.5.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | F490P EG.5.1 |
| intergenic | F490S EG.5.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1 |
| intergenic | S494P HK.1,FY.4.1.1,EG.5.1.6,FL.1.5.1,EG.5.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | P521S JE.1,XBB.1.16.15,EG.5.1.4,GJ.1.2 |
| intergenic | T573I GK.1.1,XCH.1,EG.5.1 |
| intergenic | I584V EG.5.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | T618T EG.5.1.4,EG.5.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | S704L FY.4.1.1,GK.1,GK.1.1,EG.5.1.4,XCH.1 |
| intergenic | N710N EG.5.1 |
| intergenic | T732I XBB.1.16.15,EG.5.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | L821L EG.5.1 |
| intergenic | Q853Q XBB.1.16.15,EG.5.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | L981I EG.5.1 |
| intergenic | V1061V HK.3,EG.5.1 |
| intergenic | T1076S EG.5.1 |
| S | T1076S EG.5.1 |
| intergenic | E1092D EG.5.1 |
| intergenic | Q1113K EG.5.1 |
| intergenic | E1144Q EG.5.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | E1150Q EG.5.1 |
| S | E1150Q EG.5.1 |
| intergenic | N1187N EG.5.1 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | T12I EG.5.1 |
| intergenic | K21E EG.5.1 |
| intergenic | D27H GK.1.1,EG.5.1 |
| intergenic | I37T EG.5.1 |
| intergenic | A54A EG.5.1 |
| intergenic | S60S HK.1,EG.5.1.6,HK.3,EG.5.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | H78Y GK.2.1,EG.5.1 |
| intergenic | T89I EG.5.1.8,GK.1.1,EG.5.1.4,JD.1.1 |
| intergenic | Y91C EG.5.1 |
| intergenic | A98V EG.5.1 |
| intergenic | L101L GJ.1.2,EG.5.1 |
| intergenic | Y109C EG.5.1 |
| ORF3a | Q116K EG.5.1 |
| intergenic | F207L EG.5.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | P240L EG.5.1.4,HK.3,EG.5.1 |
| intergenic | M260K JD.1.1,EG.5.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | F23F XBB.1.9.2,EG.5.1 |
| intergenic | S55F EG.5.1 |
| intergenic | V62F XBB.1.16.15,EG.5.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | F53F BA.2.86.1,EG.5.1.6 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | Y71Y GK.1.1,EG.5.1.4 |
| intergenic | T77T XCH.1,EG.5.1 |
| intergenic | L93L GK.1.1,JE.1,EG.5.1 |
| intergenic | L102L EG.5.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | H125Y GJ.1.2,JD.1.1,EG.5.1 |
| intergenic | V143V EG.5.1 |
| intergenic | R150R EG.5.1 |
| intergenic | F2L EG.5.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | D61I EG.5.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | A13T EG.5.1 |
| intergenic | G38G EG.5.1 |
| intergenic | S37F EG.5.1 |
| intergenic | G38G EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3 |
| intergenic | S81L EG.5.1 |
| intergenic | I107M EG.5.1 |
| intergenic | X122fs EG.5.1 |
| intergenic | A15S GK.1.1,EG.5.1.4 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,FL.1.5.1,EG.5.1 |
| intergenic | C37F EG.5.1 |
| intergenic | P38L XBB.1.9.2,EG.5.1 |
| intergenic | H40H EG.5.1 |
| intergenic | H40Q EG.5.1 |
| intergenic | G50R EG.5.1 |
| intergenic | I58T EG.5.1 |
| intergenic | C61C EG.5.1 |
| intergenic | V62L EG.5.1 |
| intergenic | A65V GK.1,JD.1.1,HK.3,EG.5.1 |
| intergenic | S67F EG.5.1 |
| intergenic | I71V EG.5.1 |
| intergenic | Q72P EG.5.1 |
| intergenic | T80I EG.5.1 |
| intergenic | Y111Y EG.5.1 |
| intergenic | F120fs EG.5.1.4,EG.5.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1 |
| intergenic | F53F GK.1.1,XBB.1.9.2,EG.5.1 |
| intergenic | S78S EG.5.1 |
| intergenic | D98D GK.1,EG.5.1 |
| intergenic | F110F GK.1.1,XBB.1.42.1,XBB.1.9.2,GJ.1.2,JD.1.1,EG.5.1 |
| intergenic | I157I XBB.1.42.1,EG.5.1 |
| intergenic | L159I EG.5.1 |
| intergenic | A173V GK.1.1,EG.5.1.4,JD.1.1,HK.3 |
| intergenic | E174E JD.1.1,EG.5.1 |
| intergenic | N196N EG.5.1 |
| intergenic | RG203KR GK.2.1,XBB.1.9.2,EG.5.1.4 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | G212R EG.5.1 |
| intergenic | G212G EG.5.1 |
| intergenic | F274F EG.5.1 |
| intergenic | G287G GK.1.1,EG.5.1.6,XBB.1.9.2 |
| intergenic | F314F EG.5.1 |
| intergenic | T334R EG.5.1 |
| intergenic | F346F EG.5.1 |
| N | K373Q EG.5.1 |
| intergenic | A381A XBB.1.16.15,EG.5.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1 |
| intergenic | D415D EG.5.1 |
| intergenic | S23F EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,HK.3,EG.5.1 |
| intergenic | N25N GK.1,EG.5.1.4 |
| intergenic | Q29R EG.5.1 |
| ORF10 | Q29R GJ.1.2,EG.5.1 |
| intergenic | g.C29675T EG.5.1 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,XCH.1,JD.1.1,HK.3 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAC EG.5.1.8,EG.5.1.4,GJ.1.2,FL.1.5.1,EG.5.1 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAT EG.5.1.8,EG.5.1.4,GJ.1.2,FL.1.5.1,EG.5.1 |
| intergenic | g.A29771G EG.5.1 |
| intergenic | g.G29779T JD.1.1,FL.1.5.1,EG.5.1 |
| intergenic | g.C-168T FD.1.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | P6S FD.1.1 |
| intergenic | L16F GK.1,FD.1.1 |
| intergenic | V35V FD.1.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | P80L FD.1.1 |
| intergenic | G82_M85delinsV FD.1.1 |
| intergenic | G82_V86del FL.1.5.1,FD.1.1 |
| intergenic | M85_V86del FD.1.1 |
| intergenic | M85del FD.1.1 |
| intergenic | R99C FD.1.1 |
| intergenic | L107L FD.1.1 |
| intergenic | A131V FD.1.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | K141_F143del GK.1.1,XBB.1.42.1,XBB.1.9.2,JD.1.1,HK.3,FL.1.5.1,FD.1.1 |
| intergenic | G146G FL.1.5.1,FD.1.1 |
| intergenic | Y182Y XBB.1.42.1,FD.1.1 |
| ORF1a | R226M / NSP2 |
| intergenic | R226M FD.1.1 |
| intergenic | I281V FD.1.1 |
| intergenic | R550H FD.1.1 |
| intergenic | S558F FD.1.1 |
| ORF1a | V559L / NSP2 |
| intergenic | V559L FD.1.1 |
| intergenic | L570L GK.1,GK.1.1,GK.2.1,XCH.1,FD.1.1 |
| intergenic | W630R FD.1.1 |
| intergenic | T814I FD.1.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | Y955Y EG.5.1.6,FD.1.1 |
| intergenic | N997N FD.1.1 |
| intergenic | Y1183Y FD.1.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | N1439N FD.1.1 |
| intergenic | A1473V EG.5.1,FD.1.1 |
| ORF1a | K1512R / NSP3 |
| intergenic | K1512R FD.1.1 |
| intergenic | T1543I FD.1.1 |
| intergenic | N1576N GK.1.1,FD.1.1 |
| intergenic | T1589I FD.1.1 |
| intergenic | I1607T FD.1.1 |
| intergenic | T1665I FD.1.1 |
| intergenic | N1673N FD.1.1 |
| intergenic | Y1700Y GJ.1.2,FD.1.1 |
| ORF1a | A1716V / NSP3 |
| intergenic | A1716V FD.1.1 |
| intergenic | N1749N GJ.1.2,EG.5.1,FD.1.1 |
| intergenic | P1810S FD.1.1 |
| intergenic | P1977L FD.1.1 |
| intergenic | S2015S BA.2.86.1,FD.1.1 |
| intergenic | H2092Y FD.1.1 |
| intergenic | S2114F FD.1.1 |
| intergenic | V2130I FD.1.1 |
| intergenic | L2250L FD.1.1 |
| intergenic | L2253L FD.1.1 |
| intergenic | N2275D FD.1.1 |
| intergenic | T2283I EG.5.1.4,GJ.1.2,FD.1.1 |
| intergenic | I2286M FD.1.1 |
| intergenic | S2293G FD.1.1 |
| intergenic | S2303F GJ.1.2,FD.1.1 |
| intergenic | L2318L FD.1.1 |
| intergenic | A2470A FD.1.1 |
| intergenic | T2495I EG.5.1.8,EG.5.1.4,FD.1.1 |
| intergenic | D2544D FD.1.1 |
| intergenic | P2568S FD.1.1 |
| ORF1a | L2773L / NSP4 |
| intergenic | L2773L FD.1.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | H3076Y FD.1.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | T3202T FD.1.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | I3257I XBB.1.9.2,FD.1.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | L3313L FD.1.1 |
| intergenic | L3338L EG.5.1,FD.1.1 |
| intergenic | D3355D FD.1.1 |
| intergenic | T3374T FD.1.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | A3473A FD.1.1 |
| intergenic | A3523A EG.5.1.4,HK.3,FD.1.1 |
| intergenic | A3615V EG.5.1.8,FD.1.1 |
| ORF1a | M3661T / NSP6 |
| intergenic | M3661T FD.1.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | Y3744Y FD.1.1 |
| intergenic | F3769F GJ.1.2,FD.1.1 |
| intergenic | F3770F EG.5.1.6,XBB.1.9.2,FD.1.1 |
| intergenic | F3785F EG.5.1.4,GJ.1.2,FD.1.1 |
| intergenic | R3802C FD.1.1 |
| intergenic | L3829L EG.5.1.4,FD.1.1 |
| intergenic | D3897D XBB.1.16.15,XBB.1.9.2,FL.1.5.1,FD.1.1 |
| intergenic | A3967A FD.1.1 |
| intergenic | D4020D EG.5.1,FD.1.1 |
| intergenic | S4027S FD.1.1 |
| intergenic | T4031I JD.1.1,FD.1.1 |
| intergenic | T4159I FD.1.1 |
| intergenic | T4174I FD.1.1 |
| intergenic | K4192K FD.1.1 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,EG.5.1,FD.1.1 |
| ORF1a | V4225V / NSP9 |
| intergenic | V4225V FD.1.1 |
| intergenic | L4237L EG.5.1.8,FD.1.1 |
| intergenic | A4408V FD.1.1 |
| intergenic | V4520V FD.1.1 |
| ORF1b | N4550N / NSP12 |
| intergenic | N4550N FD.1.1 |
| intergenic | N4605N XBB.1.16.15,FD.1.1 |
| ORF1b | Q4684E / NSP12 |
| intergenic | Q4684E FD.1.1 |
| intergenic | Y4686Y XBB.1.42.1,XBB.1.9.2,EG.5.1.4,FD.1.1 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | V4745I FD.1.1 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | F5086Y FD.1.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | G5231G FD.1.1 |
| intergenic | G5233G FD.1.1 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| ORF1b | P5499P / NSP13 |
| intergenic | P5499P FD.1.1 |
| intergenic | L5551L FD.1.1 |
| intergenic | E5585G FD.1.1 |
| intergenic | A5620A GK.1,GK.1.1,GK.2.1,XCH.1,JD.1.1,FD.1.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | F5746F FD.1.1 |
| ORF1b | G5763V / NSP13 |
| intergenic | G5763V FD.1.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | L5905F EG.5.1.6,EG.5.1.4,FD.1.1 |
| intergenic | T5956I GK.1.1,GJ.1.2,FD.1.1 |
| intergenic | I5967V XBB.1.16.15,XBB.1.9.2,EG.5.1.4,FD.1.1 |
| intergenic | IP5967VL FD.1.1 |
| intergenic | E6024E FD.1.1 |
| intergenic | R6137I FD.1.1 |
| intergenic | S6180I XBB.1.16.15,FD.1.1 |
| intergenic | H6208Y FD.1.1 |
| intergenic | V6241I JD.1.1,EG.5.1,FD.1.1 |
| intergenic | N6259N FD.1.1 |
| intergenic | L6308L GK.2.1,XCH.1,FD.1.1 |
| intergenic | DRYP6315EGCH FD.1.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | G6406S FD.1.1 |
| intergenic | T6485I EG.5.1.4,FD.1.1 |
| ORF1b | T6500T / NSP15 |
| intergenic | T6500T FD.1.1 |
| intergenic | Y6540Y JE.1,GJ.1.2,FD.1.1 |
| intergenic | A6544V FD.1.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| ORF1b | F6868F / NSP16 |
| intergenic | F6868F FD.1.1 |
| intergenic | L7042L FD.1.1 |
| intergenic | L5F GK.1.1,XBB.1.9.2,EG.5.1.4,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | T19I EG.5.1,FD.1.1 |
| intergenic | T19L EG.5.1,FD.1.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | I68T FD.1.1 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | S98F GK.1.1,FD.1.1 |
| intergenic | R102G FD.1.1 |
| S | R102G FD.1.1 |
| intergenic | S116S EG.5.1,FD.1.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | D178N FD.1.1 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,EG.5.1,FD.1.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | VR213EH FD.1.1 |
| S | VR213EH FD.1.1 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | N343N FD.1.1 |
| intergenic | R346T GJ.1.2,FD.1.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | I410I FD.1.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1,FD.1.1 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,FD.1.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | A570V BA.2.86.1,FD.1.1 |
| intergenic | T572I FD.1.1 |
| intergenic | E583Q GK.1,XBB.1.9.2,FD.1.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | P812L FD.1.1 |
| intergenic | S940S FD.1.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | A1020V FD.1.1 |
| intergenic | D1041D FD.1.1 |
| intergenic | Y1110Y FD.1.1 |
| intergenic | 1148 FD.1.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | K1149K XBB.1.9.2,FD.1.1 |
| intergenic | D1153Y FD.1.1 |
| intergenic | S1196S FD.1.1 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | I20I FD.1.1 |
| intergenic | F43F JE.1,FD.1.1 |
| intergenic | I62T FD.1.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | A72T FD.1.1 |
| intergenic | T89I EG.5.1.8,GK.1.1,EG.5.1.4,JD.1.1,FD.1.1 |
| intergenic | P104L FD.1.1 |
| intergenic | A143A FD.1.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | G254R FD.1.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | T30T FD.1.1 |
| intergenic | L35L FD.1.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | A69S FD.1.1 |
| M | A69S FD.1.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | H155H FD.1.1 |
| intergenic | I161I FD.1.1 |
| intergenic | T208I FD.1.1 |
| intergenic | L16L GK.1.1,FD.1.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | M1? FD.1.1 |
| intergenic | L12F FD.1.1 |
| intergenic | T28I GK.1,GK.2.1,FD.1.1 |
| intergenic | G38V FD.1.1 |
| intergenic | Q62_F63delinsH FD.1.1 |
| intergenic | S60_V74del FD.1.1 |
| ORF7a | S60_V74del FD.1.1 |
| intergenic | Q94N FD.1.1 |
| ORF7a | Q94N FD.1.1 |
| intergenic | P99L FD.1.1 |
| intergenic | E3X FD.1.1 |
| intergenic | X122SextX? FD.1.1 |
| ORF7b | g.GATTG-136_-132CATTT FD.1.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | g.A-6T FD.1.1 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | V32A FD.1.1 |
| intergenic | P85S XBB.1.9.2,FD.1.1 |
| intergenic | C102R FD.1.1 |
| ORF8 | C102R FD.1.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1,FD.1.1 |
| intergenic | R40R FD.1.1 |
| intergenic | T49I XBB.1.9.2,FD.1.1 |
| intergenic | S190G FD.1.1 |
| intergenic | RG203KR GK.2.1,XBB.1.9.2,EG.5.1.4,FD.1.1 |
| intergenic | RGT203KRI FD.1.1 |
| intergenic | Q240Q FD.1.1 |
| N | Q240Q FD.1.1 |
| intergenic | A254A FD.1.1 |
| intergenic | D377D FD.1.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | C19C BA.2.86.1,GK.1.1,GK.2.1,FD.1.1 |
| intergenic | g.G29690T FL.1.5.1,FD.1.1 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAC EG.5.1.8,EG.5.1.4,GJ.1.2,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAT EG.5.1.8,EG.5.1.4,GJ.1.2,FL.1.5.1,EG.5.1,FD.1.1 |
| intergenic | g.C-222T GJ.1.2,XCH.1,HK.3,EG.5.1,HV.1 |
| intergenic | g.T-162C JE.1,HV.1 |
| intergenic | g.G-81T HV.1 |
| intergenic | g.G-47A HV.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | L27L HV.1 |
| intergenic | S40L HV.1 |
| intergenic | H45R HV.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | KD47RG HV.1 |
| intergenic | G59G HV.1 |
| intergenic | G132G HV.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | G146C HV.1 |
| intergenic | I201M HV.1 |
| intergenic | A211V HV.1 |
| intergenic | V378V HV.1 |
| intergenic | G519S GK.1,GK.1.1,XBB.1.16.15,JD.1.1,EG.5.1,HV.1 |
| intergenic | I523I HV.1 |
| intergenic | S549S EG.5.1,HV.1 |
| intergenic | A599V HK.3,EG.5.1,HV.1 |
| intergenic | A690V EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,HK.3,EG.5.1,HV.1 |
| intergenic | A702A HV.1 |
| intergenic | K734K HV.1 |
| intergenic | E743D HV.1 |
| intergenic | T760I HV.1 |
| intergenic | N810N HV.1 |
| intergenic | T814I FD.1.1,HV.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | E1024K HV.1 |
| intergenic | N1094N HV.1 |
| intergenic | R1170C HV.1 |
| intergenic | A1204V GJ.1.2,HV.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | Y1329Y HV.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | R1386R HV.1 |
| intergenic | T1496I HV.1 |
| intergenic | T1504T HV.1 |
| intergenic | S1520P HV.1 |
| intergenic | T1589I FD.1.1,HV.1 |
| intergenic | N1749N GJ.1.2,EG.5.1,FD.1.1,HV.1 |
| intergenic | T1794I HV.1 |
| intergenic | G1819S EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3,FL.1.5.1,EG.5.1,HV.1 |
| intergenic | D1849D HV.1 |
| intergenic | L1853F HV.1 |
| intergenic | S1857L HV.1 |
| intergenic | SS1856FL HV.1 |
| intergenic | N1917N HV.1 |
| intergenic | F1925F XBB.1.16.15,HV.1 |
| intergenic | P2018S GK.1.1,HV.1 |
| intergenic | V2130F HV.1 |
| intergenic | A2139A EG.5.1.6,HV.1 |
| intergenic | L2146F HV.1 |
| intergenic | L2226L HV.1 |
| intergenic | C2239Y HV.1 |
| intergenic | S2255F HV.1 |
| intergenic | S2312S HV.1 |
| intergenic | C2445C XCH.1,HV.1 |
| intergenic | H2707H HV.1 |
| intergenic | A2850V HV.1 |
| intergenic | A2855V HV.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | A3143V EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1,HV.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | L3338L EG.5.1,FD.1.1,HV.1 |
| intergenic | T3356I GJ.1.2,HV.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | N3494N XCH.1,HV.1 |
| intergenic | L3585L HV.1 |
| intergenic | L3636L HK.3,HV.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | A3688V HV.1 |
| intergenic | A3924V HV.1 |
| intergenic | V3925I HV.1 |
| intergenic | T4083M HV.1 |
| intergenic | T4175I EG.5.1.8,HK.1,BA.2.86.1,GK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,HK.3,FL.1.5.1,HV.1 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,EG.5.1,FD.1.1,HV.1 |
| intergenic | P4220L HV.1 |
| intergenic | P4312Q HV.1 |
| intergenic | D4344D EG.5.1.4,HV.1 |
| intergenic | T4364I HV.1 |
| intergenic | A4587D HV.1 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | H4739H HV.1 |
| intergenic | V4797F HV.1 |
| intergenic | N4806N HV.1 |
| intergenic | I4842I HV.1 |
| intergenic | Y4847Y JE.1,FL.1.5.1,HV.1 |
| intergenic | F4920F HV.1 |
| intergenic | R4945R HV.1 |
| intergenic | T4948T XBB.1.42.1,HV.1 |
| intergenic | N4992N HV.1 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | D5152D HV.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | L5292L HV.1 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | N5501N XBB.1.9.2,GJ.1.2,HV.1 |
| intergenic | T5538T EG.5.1.8,HK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,HK.3,EG.5.1,HV.1 |
| intergenic | Y5541Y EG.5.1.6,XBB.1.42.1,EG.5.1.4,JD.1.1,HK.3,FL.1.5.1,EG.5.1,HV.1 |
| intergenic | D5693D HV.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | I5916V HV.1 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,HV.1 |
| intergenic | T6000I HV.1 |
| intergenic | P6076L HV.1 |
| intergenic | P6076P HV.1 |
| intergenic | A6150V HV.1 |
| intergenic | V6188I HV.1 |
| intergenic | C6210C HV.1 |
| intergenic | H6239H GJ.1.2,FL.1.5.1,HV.1 |
| intergenic | A6245T HV.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | L6420L HK.3,FL.1.5.1,EG.5.1,HV.1 |
| intergenic | D6440D HV.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | V6573V HK.3,FL.1.5.1,HV.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | N6615N HV.1 |
| intergenic | G6681V HV.1 |
| intergenic | L6706L HV.1 |
| intergenic | N6729N JD.1.1,HV.1 |
| intergenic | Y6930Y HV.1 |
| intergenic | L6961F HV.1 |
| intergenic | V6965M HV.1 |
| intergenic | L5F GK.1.1,XBB.1.9.2,EG.5.1.4,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,HV.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | S46P HV.1 |
| intergenic | Q52H EG.5.1.8,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3,EG.5.1,HV.1 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | N99N HV.1 |
| intergenic | G142D EG.5.1.8,FY.4.1.1,EG.5.1.6,EG.5.1.4,GJ.1.2,JD.1.1,FL.1.5.1,HV.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | G142fs EG.5.1.8,FY.4.1.1,GK.1.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,JD.1.1,HV.1 |
| intergenic | H146H XBB.1.9.2,HV.1 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | N148T HV.1 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,EG.5.1,FD.1.1,HV.1 |
| intergenic | R190R HV.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | S221L HV.1 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | A263A HV.1 |
| intergenic | F306F EG.5.1.8,HK.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,HK.3,EG.5.1,HV.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | A344A HV.1 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,HV.1 |
| intergenic | N354N GK.1,GK.1.1,GK.2.1,XCH.1,HV.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | L452R HV.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1,FD.1.1,HV.1 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,FD.1.1,HV.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | Y508Y HK.3,HV.1 |
| intergenic | F541F HV.1 |
| intergenic | L546L HV.1 |
| intergenic | T553I HV.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | Y674Y HV.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | S704L FY.4.1.1,GK.1,GK.1.1,EG.5.1.4,XCH.1,HV.1 |
| intergenic | Y707Y HV.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | N925N HV.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | A1078S XBB.1.42.1,HV.1 |
| intergenic | F1089F HV.1 |
| intergenic | R1091R HV.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | V1264L XBB.1.9.2,FL.1.5.1,HV.1 |
| intergenic | L1265F HV.1 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | I62L HV.1 |
| intergenic | I62I HV.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | V97I GK.1.1,HV.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | V256del HV.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | I82I HV.1 |
| intergenic | A104V BA.2.86.1,JD.1.1,HV.1 |
| intergenic | R105R HV.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | N117N FL.1.5.1,HV.1 |
| intergenic | N121N JE.1,XBB.1.16.15,HV.1 |
| intergenic | H148Y HV.1 |
| intergenic | G202G FL.1.5.1,HV.1 |
| intergenic | N207N HV.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | G38G EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3,HV.1 |
| intergenic | P45S HV.1 |
| intergenic | N52N HV.1 |
| intergenic | D69D EG.5.1.6,GJ.1.2,HV.1 |
| intergenic | F87L HV.1 |
| intergenic | L116L EG.5.1.4,HV.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | T40I HV.1 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | I9I HV.1 |
| intergenic | Q18X GJ.1.2,HV.1 |
| intergenic | V32I HV.1 |
| intergenic | S54L HV.1 |
| intergenic | S69P HV.1 |
| intergenic | Q72H GK.1.1,HV.1 |
| intergenic | I121fs GK.1,XBB.1.42.1,HV.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,HK.3,FL.1.5.1,EG.5.1,HV.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1,FD.1.1,HV.1 |
| intergenic | Y111Y GJ.1.2,HV.1 |
| intergenic | G178V HV.1 |
| intergenic | RG203KR GK.2.1,XBB.1.9.2,EG.5.1.4,FD.1.1,HV.1 |
| intergenic | F315F HV.1 |
| intergenic | I337I XCH.1,HV.1 |
| intergenic | A398V HV.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1 |
| intergenic | S23F EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,HK.3,EG.5.1,HV.1 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,XCH.1,JD.1.1,HK.3,HV.1 |
| intergenic | g.C29784T HV.1 |
| intergenic | g.C-76T EG.5.1.1 |
| intergenic | g.C-63T EG.5.1.1 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | E2K EG.5.1.1 |
| ORF1a | S17C / NSP1 |
| intergenic | S17C EG.5.1.1 |
| intergenic | R24C XBB.1.42.1,EG.5.1.4,JD.1.1,EG.5.1.1 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | V60I EG.5.1.1 |
| intergenic | M85del EG.5.1.1 |
| intergenic | Y97Y EG.5.1.8,GJ.1.2,EG.5.1.1 |
| intergenic | G105G EG.5.1.1 |
| intergenic | A117S EG.5.1.1 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| ORF1a | T170N / NSP1 |
| intergenic | N178S EG.5.1.1 |
| ORF1a | T214N / NSP2 |
| intergenic | T214N XBB.1.16.15,EG.5.1.1 |
| intergenic | S216F EG.5.1.1 |
| intergenic | P254P EG.5.1.1 |
| intergenic | P271S EG.5.1.1 |
| intergenic | I284V EG.5.1.1 |
| intergenic | S302F EG.5.1.1 |
| intergenic | T319T EG.5.1.1 |
| intergenic | S376L XBB.1.16.15,EG.5.1.1 |
| intergenic | G392D EG.5.1.1 |
| intergenic | S443F EG.5.1.1 |
| intergenic | L454F XCH.1,EG.5.1.1 |
| intergenic | A498V EG.5.1.1 |
| intergenic | G519S GK.1,GK.1.1,XBB.1.16.15,JD.1.1,EG.5.1,HV.1,EG.5.1.1 |
| intergenic | A537V EG.5.1.1 |
| intergenic | V561V EG.5.1.1 |
| intergenic | G604S HK.1,EG.5.1.1 |
| intergenic | Q676H EG.5.1.1 |
| ORF1a | K684R / NSP2 |
| intergenic | A690V EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,HK.3,EG.5.1,HV.1,EG.5.1.1 |
| intergenic | V710V EG.5.1.1 |
| intergenic | N811N XBB.1.42.1,EG.5.1.1 |
| intergenic | L815L EG.5.1,EG.5.1.1 |
| intergenic | V830V EG.5.1.1 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | G934D EG.5.1.1 |
| intergenic | D935N EG.5.1.1 |
| intergenic | S944L GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,EG.5.1.4,HK.3,EG.5.1.1 |
| intergenic | Q986K EG.5.1.1 |
| intergenic | T1017I EG.5.1.1 |
| intergenic | L1075L EG.5.1.1 |
| ORF1a | A1146T / NSP3 |
| intergenic | A1146T EG.5.1.1 |
| ORF1a | K1212R / NSP3 |
| ORF1a | I1259V / NSP3 |
| intergenic | A1268A XBB.1.16.15,EG.5.1.1 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | L1313L FL.1.5.1,EG.5.1.1 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | T1429I EG.5.1.1 |
| intergenic | L1507F FL.1.5.1,EG.5.1.1 |
| ORF1a | T1542N / NSP3 |
| intergenic | F1544F EG.5.1.1 |
| intergenic | T1567I EG.5.1.1 |
| intergenic | T1589I FD.1.1,HV.1,EG.5.1.1 |
| intergenic | P1596L EG.5.1.1 |
| intergenic | I1607T FD.1.1,EG.5.1.1 |
| intergenic | R1703R EG.5.1.1 |
| intergenic | G1819S EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3,FL.1.5.1,EG.5.1,HV.1,EG.5.1.1 |
| intergenic | T1881I HK.1,EG.5.1.1 |
| intergenic | N1922N XBB.1.16.15,XCH.1,EG.5.1.1 |
| intergenic | F1925F XBB.1.16.15,HV.1,EG.5.1.1 |
| intergenic | N1934N EG.5.1.1 |
| intergenic | E2070G EG.5.1.1 |
| intergenic | H2092H HK.1,GK.2.1,GJ.1.2,HK.3,EG.5.1.1 |
| intergenic | D2101D EG.5.1,EG.5.1.1 |
| intergenic | F2172F GK.2.1,EG.5.1.1 |
| intergenic | K2204N EG.5.1.1 |
| intergenic | S2407S EG.5.1.1 |
| intergenic | L2473L EG.5.1.1 |
| intergenic | G2509S EG.5.1.1 |
| intergenic | G2509D EG.5.1.1 |
| ORF1a | H2516R / NSP3 |
| intergenic | H2516R EG.5.1.1 |
| ORF1a | V2542I / NSP3 |
| ORF1a | V2542V / NSP3 |
| intergenic | H2659Y EG.5.1.1 |
| ORF1a | K2771T / NSP4 |
| intergenic | Y2845H EG.5.1.1 |
| intergenic | A2917A FL.1.5.1,EG.5.1.1 |
| intergenic | F2922L EG.5.1.1 |
| intergenic | S2981S EG.5.1.1 |
| intergenic | H2986H GJ.1.2,EG.5.1.1 |
| intergenic | V3021V EG.5.1.1 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | A3143V EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1,HV.1,EG.5.1.1 |
| intergenic | L3180L JD.1.1,EG.5.1.1 |
| intergenic | L3198L GK.1.1,EG.5.1.1 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | T3288T EG.5.1.1 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | N3358N EG.5.1.1 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | V3420V XBB.1.9.2,EG.5.1.1 |
| intergenic | D3479D EG.5.1.8,EG.5.1.1 |
| ORF1a | T3487N / NSP5 |
| intergenic | A3523A EG.5.1.4,HK.3,FD.1.1,EG.5.1.1 |
| intergenic | G3578G EG.5.1.1 |
| intergenic | L3606F EG.5.1.8,GK.1.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,GJ.1.2,HK.3,FL.1.5.1,EG.5.1.1 |
| intergenic | P3613S EG.5.1.1 |
| intergenic | A3615V EG.5.1.8,FD.1.1,EG.5.1.1 |
| intergenic | L3641L EG.5.1.1 |
| intergenic | L3644L EG.5.1.1 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | F3769F GJ.1.2,FD.1.1,EG.5.1.1 |
| intergenic | L3796L EG.5.1.1 |
| intergenic | Y3811Y EG.5.1.1 |
| intergenic | L3828L FL.1.5.1,EG.5.1.1 |
| intergenic | L3829L EG.5.1.4,FD.1.1,EG.5.1.1 |
| intergenic | F3838F HK.1,EG.5.1.1 |
| intergenic | K3839K EG.5.1.1 |
| intergenic | Q3966H EG.5.1.1 |
| intergenic | Y4013Y EG.5.1.1 |
| intergenic | P4058P XBB.1.42.1,XBB.1.16.15,EG.5.1,EG.5.1.1 |
| intergenic | A4136A EG.5.1.1 |
| intergenic | T4175I EG.5.1.8,HK.1,BA.2.86.1,GK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,HK.3,FL.1.5.1,HV.1,EG.5.1.1 |
| intergenic | G4178V XBB.1.16.15,EG.5.1.1 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | P4220S EG.5.1.1 |
| intergenic | T4355I EG.5.1.1 |
| ORF1b | D4455N / NSP12 |
| intergenic | D4455N HK.1,HK.3,EG.5.1,EG.5.1.1 |
| intergenic | H4467H EG.5.1.1 |
| ORF1b | I4506T / NSP12 |
| intergenic | I4506T EG.5.1.1 |
| intergenic | V4558V HK.1,EG.5.1.1 |
| intergenic | D4627D EG.5.1.1 |
| ORF1b | E4669V / NSP12 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | A4774V EG.5.1.1 |
| intergenic | N4808N EG.5.1.1 |
| intergenic | F4820F JD.1.1,FL.1.5.1,EG.5.1,EG.5.1.1 |
| intergenic | I4858T EG.5.1.1 |
| intergenic | L4861L EG.5.1.1 |
| ORF1b | GG5062CS / NSP12 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | N5135S EG.5.1.1 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | D5152D HV.1,EG.5.1.1 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | D5196D EG.5.1.1 |
| intergenic | Q5214Q EG.5.1.1 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | C5343C EG.5.1.1 |
| intergenic | Y5355Y EG.5.1,EG.5.1.1 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | T5451I EG.5.1.1 |
| intergenic | T5538T EG.5.1.8,HK.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,HK.3,EG.5.1,HV.1,EG.5.1.1 |
| intergenic | Y5541Y EG.5.1.6,XBB.1.42.1,EG.5.1.4,JD.1.1,HK.3,FL.1.5.1,EG.5.1,HV.1,EG.5.1.1 |
| intergenic | V5550V EG.5.1.1 |
| intergenic | L5551L EG.5.1.1 |
| intergenic | Y5593Y EG.5.1.1 |
| intergenic | T5691A EG.5.1.1 |
| intergenic | A5703A XCH.1,FL.1.5.1,EG.5.1.1 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | G5862G EG.5.1,EG.5.1.1 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | H5878H EG.5.1.1 |
| intergenic | D5955D EG.5.1.1 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,HV.1,EG.5.1.1 |
| intergenic | D6015D EG.5.1.1 |
| intergenic | G6018G GJ.1.2,EG.5.1.1 |
| intergenic | P6076P EG.5.1.8,HK.1,BA.2.86.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,EG.5.1,EG.5.1.1 |
| ORF1b | S6103S / NSP14 |
| intergenic | S6103S EG.5.1.1 |
| intergenic | D6104D EG.5.1.1 |
| intergenic | P6128H EG.5.1.1 |
| intergenic | P6128L XBB.1.9.2,EG.5.1.1 |
| intergenic | C6210C HV.1,EG.5.1.1 |
| intergenic | L6228L XCH.1,EG.5.1.1 |
| intergenic | K6236K EG.5.1.1 |
| intergenic | F6302F EG.5.1.1 |
| intergenic | G6341G EG.5.1.1 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | K6486E EG.5.1.1 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | V6579F FL.1.5.1,EG.5.1.1 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | A6623V GK.1,EG.5.1.1 |
| intergenic | L6706L HV.1,EG.5.1.1 |
| intergenic | F6715L JD.1.1,EG.5.1.1 |
| ORF1b | V6755I / NSP15 |
| intergenic | V6755I EG.5.1.1 |
| intergenic | K6759K EG.5.1.1 |
| intergenic | H6984H EG.5.1.1 |
| intergenic | V6995V EG.5.1.1 |
| intergenic | R7030R EG.5.1.1 |
| intergenic | L5F GK.1.1,XBB.1.9.2,EG.5.1.4,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | Q14R EG.5.1.1 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,HV.1,EG.5.1.1 |
| intergenic | T22N EG.5.1.1 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | F32F JD.1.1,EG.5.1.1 |
| intergenic | Q52H EG.5.1.8,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3,EG.5.1,HV.1,EG.5.1.1 |
| intergenic | H69del BA.2.86.1,EG.5.1.1 |
| intergenic | V70del BA.2.86.1,EG.5.1.1 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| S | T95N EG.5.1.1 |
| intergenic | K113K EG.5.1.1 |
| S | Q134Q EG.5.1.1 |
| intergenic | G142D EG.5.1.8,FY.4.1.1,EG.5.1.6,EG.5.1.4,GJ.1.2,JD.1.1,FL.1.5.1,HV.1,EG.5.1.1 |
| intergenic | G142_Y144delinsDA EG.5.1.1 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | KQ182EE FL.1.5.1,EG.5.1.1 |
| intergenic | Q183E FL.1.5.1,EG.5.1.1 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | S256L GK.1.1,EG.5.1.1 |
| intergenic | L276L XBB.1.16.15,EG.5.1.1 |
| intergenic | F306F EG.5.1.8,HK.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,HK.3,EG.5.1,HV.1,EG.5.1.1 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | N343N FD.1.1,EG.5.1.1 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,HV.1,EG.5.1.1 |
| intergenic | K356T BA.2.86.1,EG.5.1.1 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | L452L EG.5.1.1 |
| intergenic | LF455FL EG.5.1.8,HK.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,EG.5.1.4,XCH.1,JD.1.1,HK.3,EG.5.1,EG.5.1.1 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | F543F EG.5.1.1 |
| intergenic | D614G EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | G639G EG.5.1.4,EG.5.1.1 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | I692I XBB.1.16.15,GJ.1.2,HK.3,EG.5.1.1 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | A845S EG.5.1.1 |
| intergenic | I909V EG.5.1.1 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | A1080A GJ.1.2,EG.5.1.1 |
| intergenic | D1084Y JD.1.1,EG.5.1.1 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | N1158N EG.5.1.1 |
| intergenic | H1159H EG.5.1.1 |
| intergenic | Y1215Y BA.2.86.1,EG.5.1.1 |
| intergenic | 9 EG.5.1.1 |
| intergenic | F8F EG.5.1.1 |
| intergenic | V13L EG.5.1.1 |
| intergenic | K21N HK.3,EG.5.1.1 |
| intergenic | S26L EG.5.1.1 |
| intergenic | V29L XBB.1.9.2,EG.5.1.1 |
| intergenic | P36P EG.5.1.1 |
| intergenic | F43F JE.1,FD.1.1,EG.5.1.1 |
| intergenic | V50I EG.5.1.1 |
| intergenic | L53F EG.5.1.1 |
| intergenic | S60F XBB.1.9.2,EG.5.1.1 |
| intergenic | S60S EG.5.1.1 |
| intergenic | 66 EG.5.1.1 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | V97I GK.1.1,HV.1,EG.5.1.1 |
| intergenic | A99D EG.5.1.1 |
| intergenic | P104S EG.5.1.1 |
| intergenic | S117I BA.2.86.1,GK.1,EG.5.1.1 |
| intergenic | Y145Y EG.5.1.1 |
| intergenic | L203L EG.5.1.1 |
| intergenic | T223I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | E239D EG.5.1.1 |
| intergenic | P240S XBB.1.9.2,EG.5.1.1 |
| intergenic | T269T XBB.1.16.15,HK.3,EG.5.1.1 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | T30A EG.5.1.1 |
| intergenic | N48N EG.5.1.1 |
| intergenic | S68F GK.2.1,EG.5.1.1 |
| intergenic | T9T EG.5.1.1 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | F26C EG.5.1.1 |
| intergenic | L29L EG.5.1.1 |
| intergenic | N41N HK.3,EG.5.1.1 |
| intergenic | F53F BA.2.86.1,EG.5.1.6,EG.5.1.1 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | N74T EG.5.1.1 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | N117N FL.1.5.1,HV.1,EG.5.1.1 |
| ORF6 | V9G EG.5.1.1 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | I3T HK.3,EG.5.1.1 |
| ORF7a | L5V EG.5.1.1 |
| intergenic | L17F EG.5.1.1 |
| intergenic | T28I GK.1,GK.2.1,FD.1.1,EG.5.1.1 |
| intergenic | G38G EG.5.1.8,HK.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,HK.3,HV.1,EG.5.1.1 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | GI8X GK.1.1,EG.5.1.1 |
| intergenic | V62V EG.5.1.4,HK.3,EG.5.1.1 |
| intergenic | T87I FL.1.5.1,EG.5.1.1 |
| intergenic | F120F GK.1,GK.2.1,FL.1.5.1,EG.5.1.1 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | N8N EG.5.1.8,HK.1,FY.4.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,HK.3,FL.1.5.1,EG.5.1,HV.1,EG.5.1.1 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | T24I EG.5.1.1 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | K38N EG.5.1.1 |
| intergenic | N75N EG.5.1.1 |
| intergenic | R107R EG.5.1.1 |
| intergenic | T148T GJ.1.2,EG.5.1.1 |
| intergenic | T166T EG.5.1.1 |
| intergenic | G170G EG.5.1.1 |
| intergenic | A182S EG.5.1.1 |
| intergenic | P199S GJ.1.2,EG.5.1.1 |
| intergenic | RG203KR GK.2.1,XBB.1.9.2,EG.5.1.4,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | A211V EG.5.1.1 |
| intergenic | G214D EG.5.1.1 |
| intergenic | E231G EG.5.1.1 |
| intergenic | G328G EG.5.1.1 |
| intergenic | T366I HK.3,FL.1.5.1,EG.5.1.1 |
| intergenic | E367E EG.5.1.1 |
| intergenic | D371D XBB.1.16.15,XBB.1.9.2,EG.5.1.1 |
| intergenic | T379I EG.5.1.1 |
| intergenic | K387K EG.5.1.1 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1 |
| intergenic | T417A EG.5.1.1 |
| intergenic | S23F EG.5.1.8,HK.1,EG.5.1.6,EG.5.1.4,HK.3,EG.5.1,HV.1,EG.5.1.1 |
| intergenic | g.C29686A EG.5.1.1 |
| intergenic | g.A29700G XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.1 |
| intergenic | g.CGAGGCCACGCGGAGTACGATCGAGTG29733C HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,XCH.1,JD.1.1,HK.3,HV.1,EG.5.1.1 |
| intergenic | g.C29774T EG.5.1.1 |
| intergenic | g.T29804C EG.5.1.1 |
| intergenic | g.C-222T GJ.1.2,XCH.1,HK.3,EG.5.1,HV.1,XBB.1.5 |
| intergenic | g.C-126T XBB.1.9.2,XBB.1.5 |
| intergenic | g.C-59T GK.1,XBB.1.5 |
| intergenic | g.C-25T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | R24C XBB.1.42.1,EG.5.1.4,JD.1.1,EG.5.1.1,XBB.1.5 |
| intergenic | K47R EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| ORF1a | V54I / NSP1 |
| intergenic | V54I XBB.1.5 |
| intergenic | P67P XBB.1.5 |
| intergenic | G82_M85delinsV FD.1.1,XBB.1.5 |
| intergenic | G82_V86del FL.1.5.1,FD.1.1,XBB.1.5 |
| intergenic | M85_V86del FD.1.1,XBB.1.5 |
| intergenic | M85del FD.1.1,XBB.1.5 |
| intergenic | L104I XBB.1.5 |
| intergenic | S135R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | SYG135RYC XBB.1.5 |
| intergenic | K141_F143del GK.1.1,XBB.1.42.1,XBB.1.9.2,JD.1.1,HK.3,FL.1.5.1,FD.1.1,XBB.1.5 |
| intergenic | L149L XBB.1.5 |
| intergenic | R207C GJ.1.2,XBB.1.5 |
| intergenic | E246G XBB.1.5 |
| intergenic | M315T XBB.1.5 |
| ORF1a | K322T / NSP2 |
| intergenic | K322T EG.5.1.8,XBB.1.5 |
| intergenic | S443S GJ.1.2,FL.1.5.1,XBB.1.5 |
| intergenic | G519S GK.1,GK.1.1,XBB.1.16.15,JD.1.1,EG.5.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | M598I XBB.1.16.15,XBB.1.5 |
| intergenic | T654T XBB.1.5 |
| intergenic | E754G XBB.1.5 |
| intergenic | S771I XBB.1.5 |
| intergenic | T842I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | L864L XBB.1.5 |
| intergenic | F924F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | S944L GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,EG.5.1.4,HK.3,EG.5.1.1,XBB.1.5 |
| intergenic | D1184D XBB.1.5 |
| intergenic | G1307S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | P1330P XBB.1.5 |
| intergenic | A1352A EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | N1442H XBB.1.5 |
| intergenic | L1695L XBB.1.5 |
| intergenic | N1749N GJ.1.2,EG.5.1,FD.1.1,HV.1,XBB.1.5 |
| intergenic | T1761T XBB.1.5 |
| intergenic | T2016I XBB.1.5 |
| intergenic | T2069I XBB.1.5 |
| intergenic | T2093I XBB.1.5 |
| intergenic | P2221S XBB.1.5 |
| intergenic | N2272N XBB.1.5 |
| intergenic | D2299D EG.5.1,XBB.1.5 |
| intergenic | I2346I XBB.1.5 |
| intergenic | S2500S HK.3,FL.1.5.1,XBB.1.5 |
| intergenic | P2685S XBB.1.5 |
| intergenic | M2796I XBB.1.5 |
| intergenic | L2939L XBB.1.5 |
| intergenic | R2953R XBB.1.5 |
| ORF1a | F2979F / NSP4 |
| intergenic | F2979F XBB.1.5 |
| intergenic | R2985R XCH.1,XBB.1.5 |
| intergenic | L3027F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | V3053V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | T3090I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | K3187K XBB.1.5 |
| intergenic | L3201F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | D3240D FL.1.5.1,XBB.1.5 |
| intergenic | T3255I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | D3311D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | L3313L FD.1.1,XBB.1.5 |
| intergenic | R3368R GK.1.1,XBB.1.16.15,XBB.1.9.2,HK.3,XBB.1.5 |
| intergenic | P3395H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | L3513L XBB.1.5 |
| intergenic | L3606F EG.5.1.8,GK.1.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,GJ.1.2,HK.3,FL.1.5.1,EG.5.1.1,XBB.1.5 |
| intergenic | 3676del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | F3677del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | S3675del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | A3688V HV.1,XBB.1.5 |
| intergenic | T3750I JD.1.1,XBB.1.5 |
| intergenic | G3757S XBB.1.5 |
| intergenic | F3785F EG.5.1.4,GJ.1.2,FD.1.1,XBB.1.5 |
| intergenic | G3795G XBB.1.5 |
| intergenic | P3831P EG.5.1,XBB.1.5 |
| intergenic | L4070L XBB.1.5 |
| intergenic | T4129I GK.1,GJ.1.2,FL.1.5.1,XBB.1.5 |
| intergenic | I4205I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | S4398L XBB.1.5 |
| intergenic | T4640T XBB.1.5 |
| intergenic | P4715L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | G5063S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | F5086Y FD.1.1,XBB.1.5 |
| intergenic | L5150L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | F5158F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | D5225D EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | H5274Y XBB.1.5 |
| intergenic | L5338L XBB.1.5 |
| intergenic | S5360P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | T5507T XBB.1.5 |
| intergenic | Y5541Y EG.5.1.6,XBB.1.42.1,EG.5.1.4,JD.1.1,HK.3,FL.1.5.1,EG.5.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | A5620A GK.1,GK.1.1,GK.2.1,XCH.1,JD.1.1,FD.1.1,XBB.1.5 |
| intergenic | R5716C EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | I5804I XBB.1.5 |
| intergenic | Y5865Y EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | I5967V EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | C6197C XBB.1.5 |
| intergenic | L6308L GK.2.1,XCH.1,FD.1.1,XBB.1.5 |
| intergenic | DRYP6315EGCH FD.1.1,XBB.1.5 |
| intergenic | N6335N XBB.1.5 |
| intergenic | P6354P EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | L6420L HK.3,FL.1.5.1,EG.5.1,HV.1,XBB.1.5 |
| intergenic | T6564I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | E6597E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | P6860P XBB.1.5 |
| intergenic | K6958R HK.1,GK.2.1,JE.1,EG.5.1.4,FL.1.5.1,XBB.1.5 |
| ORF1b | D7067D / NSP16 |
| intergenic | D7067D XBB.1.5 |
| intergenic | L5F GK.1.1,XBB.1.9.2,EG.5.1.4,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | T19I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | L24_A27delinsS EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | T51I XBB.1.5 |
| intergenic | V83A HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | S98F GK.1.1,FD.1.1,XBB.1.5 |
| intergenic | G142_Y144delinsDV EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | H146K EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | H146Q EG.5.1.8,FY.4.1.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | Q183E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,EG.5.1,FD.1.1,HV.1,XBB.1.5 |
| intergenic | V213E EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | G252V EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | P272P XBB.1.5 |
| intergenic | G339H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | R346T EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | L368I EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | S371F EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | S373P EG.5.1.8,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | ST375FA EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | D405N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | R408S EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | K417N EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | N440K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | VG445PS EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | N460K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | ST477NK EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | E484A HK.1,FY.4.1.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | F486P HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | F490S EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | N501Y EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | Y505H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | V597V XBB.1.5 |
| intergenic | D614G XBB.1.5 |
| intergenic | QD613HG XBB.1.42.1,XBB.1.5 |
| intergenic | H655Y HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | N679K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | P681H EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | N764K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | T778T JD.1.1,HK.3,XBB.1.5 |
| intergenic | Q954H EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | N969K EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | K1073K XBB.1.5 |
| intergenic | E1144Q EG.5.1,XBB.1.5 |
| intergenic | D1146D EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | F8F EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,XBB.1.5 |
| intergenic | L53F EG.5.1.1,XBB.1.5 |
| intergenic | T64T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | L106L HK.1,FL.1.5.1,XBB.1.5 |
| intergenic | L108F XBB.1.5 |
| intergenic | L140F XBB.1.5 |
| intergenic | DT222VI XBB.1.5 |
| ORF3a | DT222VI XBB.1.5 |
| intergenic | T223I XBB.1.5 |
| intergenic | P240A XBB.1.5 |
| intergenic | E241D FL.1.5.1,XBB.1.5 |
| intergenic | T9I EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | T11A EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | Q19E EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | A63T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | F112F EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | R20R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | I26V HK.3,XBB.1.5 |
| intergenic | Y31Y GK.1.1,XBB.1.5 |
| intergenic | D61L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | L49L XBB.1.5 |
| intergenic | T120I XBB.1.5 |
| intergenic | L18L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | G8X EG.5.1.8,HK.1,FY.4.1.1,GK.1,GK.1.1,GK.2.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | K68N XBB.1.5 |
| intergenic | F120F GK.1,GK.2.1,FL.1.5.1,EG.5.1.1,XBB.1.5 |
| intergenic | g.A-3T EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | P13L EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | E31_S33del EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,GJ.1.2,XCH.1,HK.3,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | D128D GK.1,GK.1.1,GJ.1.2,XCH.1,XBB.1.5 |
| intergenic | S190G FD.1.1,XBB.1.5 |
| intergenic | RG203KR EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,GJ.1.2,XCH.1,HK.3,FL.1.5.1,EG.5.1,XBB.1.5 |
| intergenic | Q229H XBB.1.5 |
| intergenic | Y268Y XBB.1.5 |
| intergenic | F274F EG.5.1,XBB.1.5 |
| intergenic | I292I HK.3,XBB.1.5 |
| intergenic | H300Y EG.5.1.4,XBB.1.5 |
| intergenic | I304I XBB.1.5 |
| intergenic | A359A XBB.1.5 |
| intergenic | S413R EG.5.1.8,HK.1,FY.4.1.1,BA.2.86.1,GK.1,GK.1.1,GK.2.1,JE.1,EG.5.1.6,XBB.1.42.1,XBB.1.16.15,XBB.1.9.2,EG.5.1.4,XCH.1,JD.1.1,HK.3,FL.1.5.1,EG.5.1,FD.1.1,HV.1,EG.5.1.1,XBB.1.5 |
| intergenic | Q29X XBB.1.5 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAC EG.5.1.8,EG.5.1.4,GJ.1.2,FL.1.5.1,EG.5.1,FD.1.1,XBB.1.5 |
| intergenic | g.GAGGCCACGCGGAGTACGATCGAGTGTAC29734TAT EG.5.1.8,EG.5.1.4,GJ.1.2,FL.1.5.1,EG.5.1,FD.1.1,XBB.1.5 |
| intergenic | g.C29769T FL.1.5.1,XBB.1.5 |
